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Report for CCDS42738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42738.1 Public Homo sapiens 2 STEAP3 24 110 108 CCDS HistoryNCBI Gene:55240Re-query CCDS DB by CCDS ID:42738.1Re-query CCDS DB by GeneID:55240See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393110.7 ENSP00000376822.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393110.7Link to Ensembl Protein Viewer:ENSP00000376822.2Re-query CCDS DB by Nucleotide ID:ENST00000393110Re-query CCDS DB by Protein ID:ENSP00000376822
Original member Current member NCBI NM_182915.3 NP_878919.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182915.3Link to Protein Sequence:NP_878919.2Re-query CCDS DB by Nucleotide ID:NM_182915Re-query CCDS DB by Protein ID:NP_878919Link to BLAST:NP_878919.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_878919.2 498 Q658P3-2 498 100% 0 0

Chromosomal Locations for CCDS 42738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119231013 119231034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119245489 119245988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119247679 119248206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119254684 119254848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119263057 119263338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGTCGCACCAGCCTGCTGTTGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACC
TGGTGGACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGG
GGACTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAAC
CCCAAACGCACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCC
CGGAGGTCATCTTTGTGGCTGTGTTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGC
GGGCAAGATCCTGGTGGATGTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAATGCT
GAGTACCTGGCCTCCCTCTTCCCCACTTGCACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTGGACCC
TGCAGGCTGGCCCAAGGGATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGC
TGTCTCGGAGATGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGGGATCCCTGGCGTCAGCCTGGGAG
GTGGAGGCCATGCCCCTGCGCCTCCTCCCGGCCTGGAAGGTGCCCACCCTGCTGGCCCTGGGGCTCTTCG
TCTGCTTCTATGCCTACAACTTCGTCCGGGACGTTCTGCAGCCCTATGTGCAGGAAAGCCAGAACAAGTT
CTTCAAGCTGCCCGTGTCCGTGGTCAACACCACACTGCCGTGCGTGGCCTACGTGCTGCTGTCACTCGTG
TACTTGCCCGGCGTGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACT
GGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCACGC
CCTCTACAGCTTCTGCTTGCCGCTGCGCCGCGCCCACCGCTACGACCTGGTCAACCTGGCAGTCAAGCAG
GTCTTGGCCAACAAGAGCCACCTCTGGGTGGAGGAGGAGGTCTGGCGGATGGAGATCTACCTCTCCCTGG
GAGTGCTGGCCCTCGGCACGTTGTCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCAAACTCGCTCAA
CTGGAGGGAGTTCAGCTTCGTTCAGTCCTCACTGGGCTTTGTGGCCCTCGTGCTGAGCACACTGCACACG
CTCACCTACGGCTGGACCCGCGCCTTCGAGGAGAGCCGCTACAAGTTCTACCTGCCTCCCACCTTCACGC
TCACGCTGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAG
ACTCGCCAGGATCCGGAGAGGCTGGGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCC
CTGGCCGAGAAGACGAGCCACGTATGA

Translation (498 aa):
MSHQPAVATKMPEEMDKPLISLHLVDSDSSLAKVPDEAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN
PKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQLAGKILVDVSNPTEQEHLQHRESNA
EYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLASAWE
VEAMPLRLLPAWKVPTLLALGLFVCFYAYNFVRDVLQPYVQESQNKFFKLPVSVVNTTLPCVAYVLLSLV
YLPGVLAAALQLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFCAALHALYSFCLPLRRAHRYDLVNLAVKQ
VLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLNWREFSFVQSSLGFVALVLSTLHT
LTYGWTRAFEESRYKFYLPPTFTLTLLVPCVVILAKALFLLPCISRRLARIRRGWERESTIKFTLPTDHA
LAEKTSHV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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