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Report for CCDS33395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33395.1 Public Homo sapiens 2 ITM2C 24 110 108 CCDS HistoryNCBI Gene:81618Re-query CCDS DB by CCDS ID:33395.1Re-query CCDS DB by GeneID:81618See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326407.10 ENSP00000322100.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000326407.10Link to Ensembl Protein Viewer:ENSP00000322100.6Re-query CCDS DB by Nucleotide ID:ENST00000326407Re-query CCDS DB by Protein ID:ENSP00000322100
Original member Current member NCBI NM_001012516.2 NP_001012534.1 Accepted alive Link to Nucleotide Sequence:NM_001012516.2Link to Protein Sequence:NP_001012534.1Re-query CCDS DB by Nucleotide ID:NM_001012516Re-query CCDS DB by Protein ID:NP_001012534Link to BLAST:NP_001012534.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012534.1 230 Q9NQX7-3 230 100% 0 0

Chromosomal Locations for CCDS 33395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 230865026 230865145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 230873417 230873557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 230875620 230875808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 230877400 230877550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 230878008 230878099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTCGGCGT
CGGCCCCTGCGCCGGCCTCGGCCACCGAGATCCTGCTGACGCCGGCTAGGGAGGAGCAGCCCCCACAACA
TCGATCCAAGAGGGGGGGCTCAGTGGGCGGCGTGTGCTACCTGTCGATGGGCATGGTCGTGCTGCTCATG
GGCCTCGTGTTCGCCTCTGTCTACATCTACAGATACTTCTTCCTTGCGCAGCTGGCCCGAGATAACTTCT
TCCGCTGTGGTGTGCTGTATGAGGACTCCCTGTCCTCCCAGGTCCGGACTCAGATGGAGCTGGAAGAGGA
TGTGAAAATCTACCTCGACGAGAACTACGAGCGCATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGAC
CCTGCAGACATCATCCATGACTTCCAGCGGAGGGGGACCTACCTGCCGCAGACGTACATCATCCAGGAGG
AGATGGTGGTCACGGAGCATGTCAGTGACAAGGAGGCCCTGGGGTCCTTCATCTACCACCTGTGCAACGG
GAAAGACACCTACCGGCTCCGGCGCCGGGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAACTGC
AATGCCATCCGCCACTTCGAGAACACCTTCGTGGTGGAGACGCTCATCTGCGGGGTGGTGTGA

Translation (230 aa):
MVKISFQPAVAGIKGDKADKASASAPAPASATEILLTPAREEQPPQHRSKRGGSVGGVCYLSMGMVVLLM
GLVFASVYIYRYFFLAQLARDNFFRCGVLYEDSLSSQVRTQMELEEDVKIYLDENYERINVPVPQFGGGD
PADIIHDFQRRGTYLPQTYIIQEEMVVTEHVSDKEALGSFIYHLCNGKDTYRLRRRATRRRINKRGAKNC
NAIRHFENTFVVETLICGVV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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