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Report for CCDS32687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32687.1 Public Homo sapiens 17 VEZF1 24 110 108 CCDS HistoryNCBI Gene:7716Re-query CCDS DB by CCDS ID:32687.1Re-query CCDS DB by GeneID:7716See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32687.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000581208.2 ENSP00000462337.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000581208.2Link to Ensembl Protein Viewer:ENSP00000462337.1Re-query CCDS DB by Nucleotide ID:ENST00000581208Re-query CCDS DB by Protein ID:ENSP00000462337
Original member Current member NCBI NM_007146.3 NP_009077.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007146.3Link to Protein Sequence:NP_009077.2Re-query CCDS DB by Nucleotide ID:NM_007146Re-query CCDS DB by Protein ID:NP_009077Link to BLAST:NP_009077.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009077.2 521 Q14119 521 100% 0 0

Chromosomal Locations for CCDS 32687.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 57974473 57974900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57979152 57979313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57980603 57980786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57981873 57981936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57982699 57983393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57988079 57988111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGGAGGCCAACTGGACCGCGTTCCTGTTCCAGGCCCATGAAGCTTCCCATCACCAACAGCAGGCAGCAC
AGAACAGCTTGCTGCCCCTCCTGAGCTCTGCCGTGGAGCCCCCTGATCAGAAACCATTGCTTCCAATACC
AATAACTCAGAAACCTCAGGGTGCACCAGAAACATTAAAGGATGCCATTGGGATTAAAAAAGAAAAACCC
AAAACTTCATTTGTGTGCACTTACTGCAGTAAAGCTTTCAGGGACAGCTATCACCTGAGGCGCCACGAAT
CCTGCCACACAGGGATCAAGTTGGTGTCCCGGCCAAAGAAAACCCCCACCACGGTGGTTCCCCTTATCTC
TACCATCGCTGGGGACAGCAGCCGAACTTCGTTGGTCTCGACCATTGCAGGCATCTTGTCAACAGTCACT
ACATCTTCCTCGGGCACCAACCCCAGTAGCAGTGCCAGCACCACAGCTATGCCAGTGACCCAGTCTGTCA
AGAAACCCAGTAAGCCTGTCAAGAAGAACCATGCTTGTGAGATGTGTGGGAAGGCCTTCCGAGATGTGTA
CCATCTCAATCGACACAAGCTCTCCCATTCAGATGAGAAACCCTTTGAGTGTCCTATTTGTAATCAGCGC
TTCAAGAGGAAGGACCGGATGACTTACCATGTGAGGTCTCATGAAGGAGGCATCACCAAACCCTATACTT
GCAGTGTTTGTGGGAAAGGCTTCTCAAGGCCTGACCACTTAAGCTGTCATGTAAAACATGTCCATTCAAC
AGAAAGACCCTTCAAATGCCAAACGTGCACTGCTGCCTTTGCCACCAAAGACAGACTGCGGACACACATG
GTGCGCCATGAAGGCAAGGTATCATGTAACATCTGTGGGAAGCTCCTGAGTGCAGCATACATCACCAGCC
ACTTAAAGACTCATGGGCAGAGCCAAAGTATCAACTGTAATACATGTAAACAAGGCATCAGTAAAACATG
CATGAGTGAAGAGACCAGTAACCAAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAA
CAACAACAACAACATGTGACAAGCTGGCCAGGGAAGCAAGTAGAAACACTGAGACTGTGGGAAGAAGCTG
TTAAAGCAAGGAAGAAAGAAGCTGCTAACCTGTGCCAAACCTCCACGGCTGCTACGACACCTGTGACTCT
CACTACTCCATTCAGTATAACATCCTCTGTGTCGTCTGGGACTATGTCAAACCCAGTCACAGTGGCAGCT
GCAATGAGCATGAGAAGTCCAGTAAATGTTTCAAGTGCAGTTAACATAACCAGCCCAATGAACATAGGGC
ATCCTGTAACTATAACCAGTCCATTATCCATGACCTCTCCTTTAACACTCACTACCCCAGTCAACCTCCC
CACCCCCGTCACTGCCCCAGTGAATATAGCACACCCTGTCACCATCACATCTCCAATGAATCTACCCACA
CCTATGACATTAGCCGCCCCTCTCAATATAGCAATGAGACCTGTAGAGAGCATGCCTTTCTTGCCCCAAG
CTTTGCCTACATCACCGCCTTGGTAA

Translation (521 aa):
MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKP
KTSFVCTYCSKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVT
TSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQR
FKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHM
VRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQ
QQQQHVTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNPVTVAA
AMSMRSPVNVSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTPVNLPTPVTAPVNIAHPVTITSPMNLPT
PMTLAAPLNIAMRPVESMPFLPQALPTSPPW


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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