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Report for CCDS46513.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46513.1 Public Homo sapiens 2 MREG 24 110 108 CCDS HistoryNCBI Gene:55686Re-query CCDS DB by CCDS ID:46513.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46513.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263268.11 ENSP00000263268.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263268.11Link to Ensembl Protein Viewer:ENSP00000263268.6Re-query CCDS DB by Nucleotide ID:ENST00000263268Re-query CCDS DB by Protein ID:ENSP00000263268
Original member Current member EBI ENST00000620139.4 ENSP00000484331.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620139.4Link to Ensembl Protein Viewer:ENSP00000484331.1Re-query CCDS DB by Nucleotide ID:ENST00000620139Re-query CCDS DB by Protein ID:ENSP00000484331
Original member Current member NCBI NM_018000.3 NP_060470.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018000.3Link to Protein Sequence:NP_060470.2Re-query CCDS DB by Nucleotide ID:NM_018000Re-query CCDS DB by Protein ID:NP_060470Link to BLAST:NP_060470.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060470.2 214 Q8N565-1 214 100% 0 0

Chromosomal Locations for CCDS 46513.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 215944863 215944997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 215945571 215945734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 215947023 215947113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 215996306 215996465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 216013233 216013327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGGGCTGAGGGACTGGCTGAGAACCGTGTGCTGCTGCTGCGGGTGCGAGTGCTTGGAGGAGCGCGCCC
TGCCTGAGAAGGAGCCCCTCGTCAGTGATAACAATCCATATTCCTCATTTGGAGCAACTCTGGTGAGGGA
TGATGAGAAGAATTTATGGAGTATGCCCCATGATGTGTCCCACACAGAGGCAGACGACGACAGAACCCTG
TACAATTTGATAGTCATTCGTAATCAGCAGGCCAAAGACTCAGAGGAGTGGCAGAAGCTCAACTATGATA
TCCATACCCTGCGGCAGGTTCGAAGGGAAGTAAGAAACAGATGGAAGTGCATCTTAGAAGATTTAGGTTT
TCAAAAGGAAGCTGACTCTTTGTTGTCAGTGACTAAACTCAGCACCATCAGTGATTCTAAAAACACAAGG
AAAGCTCGAGAGATGTTGTTAAAACTGGCTGAAGAAACCAATATTTTCCCAACAAGTTGGGAGCTCTCAG
AGAGATATCTCTTTGTTGTGGACCGTCTCATTGCACTTGATGCTGCAGAAGAGTTCTTTAAGCTTGCTCG
TCGAACTTACCCCAAGAAGCCTGGGGTTCCATGCCTGGCAGATGGCCAGAAAGAACTGCACTACCTTCCG
TTTCCAAGTCCCTAA

Translation (214 aa):
MGLRDWLRTVCCCCGCECLEERALPEKEPLVSDNNPYSSFGATLVRDDEKNLWSMPHDVSHTEADDDRTL
YNLIVIRNQQAKDSEEWQKLNYDIHTLRQVRREVRNRWKCILEDLGFQKEADSLLSVTKLSTISDSKNTR
KAREMLLKLAEETNIFPTSWELSERYLFVVDRLIALDAAEEFFKLARRTYPKKPGVPCLADGQKELHYLP
FPSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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