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Report for CCDS72111.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72111.1 Public Mus musculus 8 Fut10 23 108 98 CCDS HistoryNCBI Gene:171167Re-query CCDS DB by CCDS ID:72111.1Re-query CCDS DB by GeneID:171167See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72111.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110527.8 ENSMUSP00000106156.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110527.8Link to Ensembl Protein Viewer:ENSMUSP00000106156.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110527Re-query CCDS DB by Protein ID:ENSMUSP00000106156
Original member NCBI NM_001286425.1 NP_001273354.1 Updated not alive Link to Nucleotide Sequence:NM_001286425.1Link to Protein Sequence:NP_001273354.1Re-query CCDS DB by Nucleotide ID:NM_001286425Re-query CCDS DB by Protein ID:NP_001273354
Current member NCBI NM_001286425.2 NP_001273354.1 Accepted alive Link to Nucleotide Sequence:NM_001286425.2Link to Protein Sequence:NP_001273354.1Re-query CCDS DB by Nucleotide ID:NM_001286425Re-query CCDS DB by Protein ID:NP_001273354Link to BLAST:NP_001273354.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273354.1 136 Q5F2L2-3 136 100% 0 0

Chromosomal Locations for CCDS 72111.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 31195209 31195289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31201210 31201504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31259900 31259934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (411 nt):
ATGGTGCGGTTTCAGAGGAGGAAGCTTCTGGCCTCTTGCCTGTGTGTGACAGCGACTGTCTTTCTGATGG
TCACACTCCAGGTAGTGGTTGAGCTTGGGAAATTTGAAAGGAAGAAGCTTAAAGACTCCAATGTGCAAGA
CGGACATAGAGATGTGGAGGGAGAGCCTAAACACCTGGAGCCGTTTCCTGAAAAGGAAGCACTGGCCTTG
GCTGGGAGGACAAAGGTGGATGCTGGTAGCTACCCCATCGTGCTGTGGTGGTCCCCACTGACTGGAGAGA
CTGGCAGGCTTGGCCAGTGTGGGGCAGATGCTTGCTTCTTTACCATCAACAGGACCTTCCAGCATCATCC
GATGACCAGGGCCTTCCTATTCTACGGGCTTACCACCCAAACAATGGAAGGCAGATGTTAG

Translation (136 aa):
MVRFQRRKLLASCLCVTATVFLMVTLQVVVELGKFERKKLKDSNVQDGHRDVEGEPKHLEPFPEKEALAL
AGRTKVDAGSYPIVLWWSPLTGETGRLGQCGADACFFTINRTFQHHPMTRAFLFYGLTTQTMEGRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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