NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS66486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66486.1 Public Homo sapiens 12 C12orf43 24 110 108 CCDS HistoryNCBI Gene:64897Re-query CCDS DB by CCDS ID:66486.1Re-query CCDS DB by GeneID:64897See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 66486.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445832.7 ENSP00000409788.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445832.7Link to Ensembl Protein Viewer:ENSP00000409788.3Re-query CCDS DB by Nucleotide ID:ENST00000445832Re-query CCDS DB by Protein ID:ENSP00000409788
Original member Current member NCBI NM_001286198.2 NP_001273127.1 Accepted alive Link to Nucleotide Sequence:NM_001286198.2Link to Protein Sequence:NP_001273127.1Re-query CCDS DB by Nucleotide ID:NM_001286198Re-query CCDS DB by Protein ID:NP_001273127Link to BLAST:NP_001273127.1

Chromosomal Locations for CCDS 66486.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 121004153 121004492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121005003 121005093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121006321 121006394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121010828 121010926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121011104 121011146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121012430 121012448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGTTCTGTCAAAACCCAGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGG
TGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAA
GCTGGGAGCCCTGCTGGACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTA
CAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAGGCCGTGAGAAGG
AAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGTGACGAGGAGTG
GCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCCGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGA
ACAGTGGAGAAGGAGGCAAAGAAGAAAAGGAAGTTGAAAAAGAAAGCCAAGAAGGTGGCCAGTGTCGACT
CGGCTGTCGCTGCCACCACCCCCACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGG
GGACCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCA
CCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGA

Translation (221 aa):
MFCQNPGAANSQLSTSQPSLRHKVNEHEQDGNELQTTPEFRAHVAKKLGALLDSFITISEAAKEPAKAKV
QKVALEDDGFRLFFTSVPGGREKEESPQPRRKRQPSSSSSEDSDEEWRRCREAAVSASDILQESAIHSPG
TVEKEAKKKRKLKKKAKKVASVDSAVAATTPTSMATVQKQKSGELNGDQVSLGTKKKKKAKKASETSPFP
PAKSATAIPAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH