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Report for CCDS54608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54608.1 Public Homo sapiens 3 EBLN2 24 110 108 CCDS HistoryNCBI Gene:55096Re-query CCDS DB by CCDS ID:54608.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54608.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533473.1 ENSP00000432104.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533473.1Link to Ensembl Protein Viewer:ENSP00000432104.1Re-query CCDS DB by Nucleotide ID:ENST00000533473Re-query CCDS DB by Protein ID:ENSP00000432104
Original member Current member NCBI NM_018029.4 NP_060499.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018029.4Link to Protein Sequence:NP_060499.3Re-query CCDS DB by Nucleotide ID:NM_018029Re-query CCDS DB by Protein ID:NP_060499Link to BLAST:NP_060499.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060499.3 272 Q6P2I7 272 100% 0 0

Chromosomal Locations for CCDS 54608.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 73062082 73062900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGGGTTATTTTCTTAAATTGTATGCTTATGTTAATTCTCACAGTCTTTTTGTTTGGGTCTGTGACAGAT
CTTACAAAAGATCTTTTAGACCTATGATTCTTAACAAAATTAAAGAATTAAGTCGGAACCAATTTTCCAC
AATGTCTCATCTAAGAAAGGACTCACAGCCCAGCAGCCCAGGAGATGACGCAATGGACAGGAGTGGGCTC
CCTGACCTTCAAGGAAGATTTGAGCTATCTGGGAAAAACAGACAGTATCCACTGGATGCATTGGAACCCC
AACCCAGCATTGGGGATATTAAGGACATTAAAAAAGCAGCCAAGTCTATGCTAGACCCAGCACATAAATC
TCATTTCCACCCTGTGACCCCAAGTTTAGTATTCTTGTGTTTCATATTTGATGGGTTACACCAGGCATTA
CTGAGTGTTGGTGTGAGCAAGAGGTCTAATACTGTGGTTGGGAATGAGAACGAGGAAAGGGGTACTCCTT
ATGCTAGCAGATTCAAAGATATGCCTAACTTTATTGCCCTTGAGAAGTCATCAGTTCTCCGCCACTGCTG
TGACCTTTTGATAGGCATTGCGGCTGGATCAAGTGATAAGATTTGCACCAGCAGTCTCCAAGTTCAGAGA
CGATTCAAGGCAATGATGGCATCTATTGGAAGACTTTCACATGGTGAGAGTGCTGATCTGCTAATCAGCT
GCAATGCAGAATCAGCCATAGGTTGGATCAGCTCAAGACCATGGGTTGGAGAATTAATGTTCACACTTCT
ATTTGGAGACTTTGAATCCCCTCTACACAAGCTACGCAAGTCAAGTTAG

Translation (272 aa):
MGYFLKLYAYVNSHSLFVWVCDRSYKRSFRPMILNKIKELSRNQFSTMSHLRKDSQPSSPGDDAMDRSGL
PDLQGRFELSGKNRQYPLDALEPQPSIGDIKDIKKAAKSMLDPAHKSHFHPVTPSLVFLCFIFDGLHQAL
LSVGVSKRSNTVVGNENEERGTPYASRFKDMPNFIALEKSSVLRHCCDLLIGIAAGSSDKICTSSLQVQR
RFKAMMASIGRLSHGESADLLISCNAESAIGWISSRPWVGELMFTLLFGDFESPLHKLRKSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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