CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS32086.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
32086.1 |
Public |
Homo sapiens |
14 |
FBXO34 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55030](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:32086.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 32086.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000313833.5 |
ENSP00000313159.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000313833.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000313159.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000313833](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000313159](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000440021.1 |
ENSP00000394117.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000440021.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000394117.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000440021](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000394117](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000680682.1 |
ENSP00000504946.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000680682.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000504946.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000680682](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000504946](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000681904.1 |
ENSP00000505815.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000681904.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000505815.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000681904](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000505815](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000679934.1 |
ENSP00000505918.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000679934.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000505918.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000679934](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000505918](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000681074.1 |
ENSP00000506304.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000681074.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000506304.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000681074](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000506304](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000681400.1 |
ENSP00000506349.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000681400.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000506349.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000681400](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000506349](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000680658.1 |
ENSP00000506499.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000680658.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000506499.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000680658](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000506499](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_017943.4 |
NP_060413.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_017943.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_060413.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_017943](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_060413](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_060413.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_152231.2 |
NP_689417.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_152231.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_689417.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_152231](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_689417](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_689417.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 32086.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2136 nt): ATGCACCTAAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCCCCCGGAAGTCAGCAGGGAAACGCAGA GAACTCCTATGAACCACCAAAAGGCTGTAAATGATGAAACATGCAAAGCTAGCCACATAACATCAAGTGT CTTTCCTTCAGCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTTGGGATCCTTTCTCCAAATGTTCTG TGCAGTATGAGTGGGAAGAGTCCTGTAGAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTG CAACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCTGTTGTGAAACCTGGAAATACCAA GGAAAAAATTGCATTCTTTGCATCCCACCAGTGTAGTAACAGGATAGGATCTATGAAAATAAAAAGTTCC TGGGATATTGATGGGAGAGCTACTAAGAGAAGGAAAAAATCAGGGGATCTTAAAAAAGCCAAGGTACAGG TGGAAAGGATGAGGGAGGTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCATGTGGCATTGAGCACTG TTCTGTGCACTATGTGAGTGACAGTGGGGATGGAGTCTATGCTGGGAGGCCTCTGTCAGTTATACAGATG GTTGCCTTCTTGGAGCAAAGAGCCAGTGCTCTGCTAGCTAGCTGTTCAAAAAACTGCACAAACTCACCTG CAATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTATTCTGCCCCAGGAGC TTGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTT GACATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAA GGAATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA AACAAAGAAAGGCGTCTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGGGTCTGTATCTGTGGATTGT GGCCCTTCAAGAGCTGATCGTTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGCTTCTCAGGACTGCC CCCCATTGCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGAGTTAGAGCCGGGTTCGCAAACTGCCGT GAAAAACAGCAACAGATATGATGTGGAAATGACAGATGAACTCGTTGGGTTACCTTTTTCCTCTCATACC TATTCCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCCTTACTA GCCGAAATCCTGATCAAAGAAAAGAATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA GCCTTCCATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTTTTTTTTGCCACCTGGTCAGCAC TTGTCAGACTATTCCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG CTGCTGGGGGTGACAGTGCATCTGAGGAAAAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCCTCTTC TGTGGAAAGTACATTACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAG ACCAGGTTTAAAATCCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTTTCTGCCCCACCACATTATGG TAAAAATCTTCAGGTTACTTCCCACCAAGAGTTTAGTGGCCCTTAAATGTACCTGCTGCTATTTCAAGTT TATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT CCTTGCAAACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGTGCCGATGGCACCCCAAGCCCT ATTGCCAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG CTGTAAGCTGGGGCTTCATGACAATCACTGGGTTCCTGCCTGCCACAGCTTTAATCGGGCAATCCATAAG AAAGCAAAAGGGACTGAAGCTGAAGAGGAATACTAA
Translation (711 aa): MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVL CSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKIAFFASHQCSNRIGSMKIKSS WDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSDSGDGVYAGRPLSVIQM VAFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVL DMVAKLESECLKRQGQREPGSLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDC GPSRADRCSPKEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPGMLFFLPPGQH LSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVESTLPVLEASSWKKQVSHDFLE TRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCYFKFIIEYYNIRPADSRWVRDPRYRED PCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHK KAKGTEAEEEY
|