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Report for CCDS6751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6751.1 Public Homo sapiens 9 PLPPR1 24 110 108 CCDS HistoryNCBI Gene:54886Re-query CCDS DB by CCDS ID:6751.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374874.8 ENSP00000364008.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374874.8Link to Ensembl Protein Viewer:ENSP00000364008.3Re-query CCDS DB by Nucleotide ID:ENST00000374874Re-query CCDS DB by Protein ID:ENSP00000364008
Original member Current member EBI ENST00000395056.2 ENSP00000378496.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395056.2Link to Ensembl Protein Viewer:ENSP00000378496.1Re-query CCDS DB by Nucleotide ID:ENST00000395056Re-query CCDS DB by Protein ID:ENSP00000378496
Original member Current member NCBI NM_017753.3 NP_060223.2 Accepted alive Link to Nucleotide Sequence:NM_017753.3Link to Protein Sequence:NP_060223.2Re-query CCDS DB by Nucleotide ID:NM_017753Re-query CCDS DB by Protein ID:NP_060223Link to BLAST:NP_060223.2
Original member Current member NCBI NM_207299.2 NP_997182.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207299.2Link to Protein Sequence:NP_997182.1Re-query CCDS DB by Nucleotide ID:NM_207299Re-query CCDS DB by Protein ID:NP_997182Link to BLAST:NP_997182.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060223.2 325 Q8TBJ4 325 100% 0 0
NP_997182.1 325 Q8TBJ4 325 100% 0 0

Chromosomal Locations for CCDS 6751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 101185495 101185557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101269880 101270068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101286104 101286236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101309211 101309461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101312798 101312974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101317365 101317496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 101324025 101324057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGCTGTAGGAAACAACACTCAACGAAGTTATTCCATCATCCCGTGTTTTATATTTGTTGAGCTTGTCA
TCATGGCTGGGACAGTGCTGCTTGCCTACTACTTCGAATGCACTGACACTTTTCAGGTGCATATCCAAGG
ATTCTTCTGTCAGGACGGAGACTTAATGAAGCCTTACCCAGGGACAGAGGAAGAAAGCTTCATCACCCCT
CTGGTGCTCTATTGTGTGCTGGCTGCCACCCCAACTGCTATTATTTTTATTGGTGAGATATCCATGTATT
TCATAAAATCAACAAGAGAATCCCTGATTGCTCAGGAGAAAACAATTCTGACCGGAGAATGCTGTTACCT
GAACCCCTTACTTCGAAGGATCATAAGATTCACAGGGGTGTTTGCATTTGGACTTTTTGCTACTGACATT
TTTGTAAACGCCGGACAAGTGGTCACTGGGCACTTAACGCCATACTTCCTGACTGTGTGCAAGCCAAACT
ACACCAGTGCAGACTGCCAAGCGCACCACCAGTTTATAAACAATGGGAACATTTGTACTGGGGACCTGGA
AGTGATAGAAAAGGCTCGGAGATCCTTTCCCTCCAAACACGCTGCTCTGAGCATTTACTCCGCCTTATAT
GCCACGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCG
GAACTCTCTGCACAGCCTTCCTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGT
GATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGTTCATAACTTTAAA
GGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAA
GGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGA

Translation (325 aa):
MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTEEESFITP
LVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPLLRRIIRFTGVFAFGLFATDI
FVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALY
ATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK
GTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHSASMTEVT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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