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Report for CCDS36861.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36861.1 Public Mus musculus 14 Dph3 23 108 98 CCDS HistoryNCBI Gene:105638Re-query CCDS DB by CCDS ID:36861.1Re-query CCDS DB by GeneID:105638See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36861.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022461.10 ENSMUSP00000022461.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022461.10Link to Ensembl Protein Viewer:ENSMUSP00000022461.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022461Re-query CCDS DB by Protein ID:ENSMUSP00000022461
Original member Current member EBI ENSMUST00000067955.11 ENSMUSP00000068491.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067955.11Link to Ensembl Protein Viewer:ENSMUSP00000068491.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000067955Re-query CCDS DB by Protein ID:ENSMUSP00000068491
Original member Current member NCBI NM_001284346.1 NP_001271275.1 Accepted alive Link to Nucleotide Sequence:NM_001284346.1Link to Protein Sequence:NP_001271275.1Re-query CCDS DB by Nucleotide ID:NM_001284346Re-query CCDS DB by Protein ID:NP_001271275Link to BLAST:NP_001271275.1
Original member Current member NCBI NM_172254.4 NP_758458.1 Accepted alive Link to Nucleotide Sequence:NM_172254.4Link to Protein Sequence:NP_758458.1Re-query CCDS DB by Nucleotide ID:NM_172254Re-query CCDS DB by Protein ID:NP_758458Link to BLAST:NP_758458.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271275.1 82 Q8K0W9 82 100% 0 0
NP_758458.1 82 Q8K0W9 82 100% 0 0

Chromosomal Locations for CCDS 36861.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32083181 32083246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32084907 32084981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32085410 32085517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (249 nt):
ATGGCGGTGTTTCACGACGAGGTGGAGATCGAGGACTTTCAATATGACGAGGACTCGGAGACATATTTCT
ACCCTTGCCCCTGTGGGGATAACTTTGCCATCACCAAGGAAGATTTGGAAAATGGAGAAGATGTGGCCAC
GTGTCCTAGCTGCTCACTCATTATAAAAGTGATTTATGACAAAGATCAGTTCATGTGTGGAGAAACAGTC
CCAGCACCTTCAACCAACAAGGAGTTAGTTAAATGCTGA

Translation (82 aa):
MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFAITKEDLENGEDVATCPSCSLIIKVIYDKDQFMCGETV
PAPSTNKELVKC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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