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Report for CCDS52268.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52268.1 Public Mus musculus 7 Cers3 23 108 98 CCDS HistoryNCBI Gene:545975Re-query CCDS DB by CCDS ID:52268.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52268.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066475.10 ENSMUSP00000069238.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066475.10Link to Ensembl Protein Viewer:ENSMUSP00000069238.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000066475Re-query CCDS DB by Protein ID:ENSMUSP00000069238
Original member Current member NCBI NM_001164201.1 NP_001157673.1 Accepted alive Link to Nucleotide Sequence:NM_001164201.1Link to Protein Sequence:NP_001157673.1Re-query CCDS DB by Nucleotide ID:NM_001164201Re-query CCDS DB by Protein ID:NP_001157673Link to BLAST:NP_001157673.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157673.1 419 Q1A3B0-2 419 100% 0 0

Chromosomal Locations for CCDS 52268.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 66743645 66743751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66764175 66764348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66773590 66773704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66779551 66779669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66781794 66781851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66783402 66783452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66784777 66784869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66786012 66786140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66789589 66789695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66795786 66795939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66821690 66821842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGAGGTGTGTTGCTCTTGAGAACAAAGCTGCCTGGAACGGGAAGCCTCTCCAGTTGCTCCCCACAGGCG
AGGAGTATCCTGTGCAGACTGGCGCTTTGGGAAGAAGAATGTTTCAGACGTTTAGAAAATGGTTCTGGTC
GGAGAGATACTGGCTTCCTCCAACAATAAAGTGGTCAGACCTGGAAGATCATGATGGGCTTGTCTTCGTG
AAAGCTTCCCACTTATACATCACAATTCCATATGCCTTTCTTTTAATGGTCGTCAGATACTTCTTTGAAA
AGTTTGTTGCTACACCTCTAGCAAATGCACTTGGCATTAAAAAGACACAGCACAAAATTAAACCAAATGC
CATCTTAGAGAATTTTTTCAAGCATTCCACAAGCAAACCATCACATACTGATATTTATGGACTGGCAAAG
AAGTGTAACTTGACAGAGCGCCAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCA
GGCTGCAGAAATTCCAGGAGTCTTGCTGGCGATTTACATTTTACTTGCTGATAACCATGGCTGGAGCTGT
ATTTCTGTATGACAAACCATGGGCATATGACCTCTGGGAGGTTTGGAATGACTATCCCAGACAGCCTTTG
CTGCCGTCCCAGTACTGGTACTACATTTTGGAGATGAGTTTTTATTGGTCACTGGTGTTTAGCCTGAGCA
CTGATATCAAGAGGAAGGACTTCCTCGCTCATGTCATCCACCACCTGGCTGCTATTAGTCTGATGAGCTT
CTCCTGGTGTGCTAATTACATTCGCAGTGGGACCCTCGTGATGTTTATTCATGATATATCTGACATTTGG
CTAGAGTCTGCTAAGATGTTTTCCTATGCTGGATGGAAGCAGACGTGTAACACCCTGTTCTTCATCTTCA
CCGTCGTCTTCTTCATTAGCCGATTCATTATTTTTCCATTCTGGATTCTGTACTGCACTCTGATCCTGCC
TTTGCACTATCTCGAGCCCTTCTTCTCCTACATCTTCCTCAACCTCCAACTCATGATCCTTCAGGGCCTC
CACGTTTACTGGGGTTACTTTATCCTGAAGATGCTCAACAGATGCATATTCACGCAGAACGTCCAGGATG
TGAGGAGTGACAACGAAGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGCAGAGAGCACCAAGGGCAAAGA
GACAGAGTATTTGAAGAATGGCCTTGGGACCAACAGGCATCTCATTGCCAATGGTCAGCATGGCCGTTAG

Translation (419 aa):
MRCVALENKAAWNGKPLQLLPTGEEYPVQTGALGRRMFQTFRKWFWSERYWLPPTIKWSDLEDHDGLVFV
KASHLYITIPYAFLLMVVRYFFEKFVATPLANALGIKKTQHKIKPNAILENFFKHSTSKPSHTDIYGLAK
KCNLTERQVERWLRIRQKQNKPCRLQKFQESCWRFTFYLLITMAGAVFLYDKPWAYDLWEVWNDYPRQPL
LPSQYWYYILEMSFYWSLVFSLSTDIKRKDFLAHVIHHLAAISLMSFSWCANYIRSGTLVMFIHDISDIW
LESAKMFSYAGWKQTCNTLFFIFTVVFFISRFIIFPFWILYCTLILPLHYLEPFFSYIFLNLQLMILQGL
HVYWGYFILKMLNRCIFTQNVQDVRSDNEEEEEEEEEEEAESTKGKETEYLKNGLGTNRHLIANGQHGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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