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Report for CCDS53630.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53630.1 Public Homo sapiens 11 OR5M10 24 110 108 CCDS HistoryNCBI Gene:390167Re-query CCDS DB by CCDS ID:53630.1Re-query CCDS DB by GeneID:390167See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53630.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000526538.2 ENSP00000435416.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000526538.2Link to Ensembl Protein Viewer:ENSP00000435416.2Re-query CCDS DB by Nucleotide ID:ENST00000526538Re-query CCDS DB by Protein ID:ENSP00000435416
Original member Current member NCBI NM_001004741.1 NP_001004741.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004741.1Link to Protein Sequence:NP_001004741.1Re-query CCDS DB by Nucleotide ID:NM_001004741Re-query CCDS DB by Protein ID:NP_001004741Link to BLAST:NP_001004741.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004741.1 315 Q6IEU7 315 100% 0 0

Chromosomal Locations for CCDS 53630.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56576774 56577721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGTTGTCCCCAAACCACACCATAGTGACAGAATTCATTCTCTTAGGACTGACAGACGACCCAGTGCTAG
AGAAGATCCTGTTTGGGGTGTTCCTGGCGATCTACCTAATCACACTGGCAGGCAACCTGTGCATGATCCT
GCTGATCAGGACCAATTCCCAACTGCAAACACCCATGTATTTCTTCCTTGGTCACCTCTCCTTTGTAGAC
ATTTGCTATTCTTCCAATGTTACTCCAAATATGCTGCACAATTTCCTCTCAGAACAGAAGACCATCTCCT
ACGCTGGATGCTTCACACAGTGTCTTCTCTTCATCGCCCTAGTGATCACTGAGTTTTACTTCCTTGCTTC
AATGGCATTGGATCGCTATGTAGCCATTTGCAGCCCTTTACATTACAGTTCCAGGATGTCCAAGAACATT
TGCATCTCTCTGGTCACTGTGCCTTACATGTATGGCTTCCTTAATGGGCTCTCTCAGACACTGCTGACCT
TTCACTTATCCTTCTGTGGCTCCCTTGAAATCAATCATTTCTACTGCGCTGATCCTCCTCTTATCATGCT
GGCCTGCTCTGACACCCGTGTCAAAAAGATGGCAATGTTTGTAGTTGCAGGCTTTACTCTCTCAAGCTCT
CTCTTCATCATTCTTCTGTCCTATCTTTTCATTTTTGCAGCGATCTTCAGGATCCGTTCTGCTGAAGGCA
GGCACAAAGCCTTTTCTACGTGTGCTTCCCACCTGACAATAGTCACTTTGTTTTATGGAACCCTCTTCTG
CATGTACGTAAGGCCTCCATCAGAGAAGTCTGTAGAGGAGTCCAAAATAATTGCAGTCTTTTATACTTTT
TTGAGCCCAATGCTGAACCCATTGATCTATAGCCTACGGAACAGAGATGTAATCCTTGCCATACAACAAA
TGATTAGGGGAAAATCCTTTTGTAAAATTGCAGTTTAG

Translation (315 aa):
MLSPNHTIVTEFILLGLTDDPVLEKILFGVFLAIYLITLAGNLCMILLIRTNSQLQTPMYFFLGHLSFVD
ICYSSNVTPNMLHNFLSEQKTISYAGCFTQCLLFIALVITEFYFLASMALDRYVAICSPLHYSSRMSKNI
CISLVTVPYMYGFLNGLSQTLLTFHLSFCGSLEINHFYCADPPLIMLACSDTRVKKMAMFVVAGFTLSSS
LFIILLSYLFIFAAIFRIRSAEGRHKAFSTCASHLTIVTLFYGTLFCMYVRPPSEKSVEESKIIAVFYTF
LSPMLNPLIYSLRNRDVILAIQQMIRGKSFCKIAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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