CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS38791.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
38791.1 |
Public |
Mus musculus |
4 |
Frem1 |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 38791.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000071708.11 |
ENSMUSP00000071627.5 |
Accepted |
alive |
|
|
|
NCBI |
NM_177863.5 |
NP_808531.2 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_808531.2 |
2191 |
Q684R7-1 |
2191 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 38791.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6576 nt): ATGCACTCTCCAGGCTGCACTGGGCCCAAGGCTCAGTGGTTCTTGCTGCTCCAGCTGCTTCTGCTGCACC TGGACCGGGTCAGTGCCACCTTCATCAGCATCAACCGGGGCCTGAGGGTGATGAAGGGTAGTTCTGCCTT CCTGTCTGGAGATCACCTGAGGGTTGCAGTCCCTAAAGAAAAGGACGCCTGCAGACTGGAGGTGGTGATG AACGAGCCCGTAACCCAGAGGGTTGGGAAACTCTCTCCACAGGTCTTTGATTGCCATTTTCTTCCCAACG AAGTGAAGTATGTTCACAATGGATGCCCAATTCTGGATGAAGACTCTGTGAAGCTTAGACTTTACAGGTT TACTGAAACAGACACCTTCATGGAAACCTTTCTCTTGCGGGTTTATCTTGTGGAACCAGACTGTAACATC ATCCGTATGAGCAGTAATGTGTTGGAAGTGACTGAATTCTATGGCTTATCGCAAGCCATTGATAAGAACC TGCTCCAGTTTGATTATGATAGGACTGCCAGCCTGGATTGCACCATCAGACTAGACCCACTGAGGACTCA GCTGCCAGCTCACGGCAAGCTGGTCGTGGTGAATCGTAAGTCAGAGGGGCCTCGTGGAGATCAGCCACAC AGCTTCTTCTCTGAGACAGAGCTAGGGGCTGGACTGAAGTGTCCAGATGGAAGCTGTGCCCTGGAATTGA AGCAAGTGGCAAGTCTGAAAGTGAGCTGTGAGGAGTTTCTGCTGACGGGGTTTCACTACCAACACATGCA GCCCCCTTCACCCAACATTGATTACATCCCCATTCAGTTGGATCTCACCGACAGAAGGAGCAAAACCGTA TACAAGTCAGAGAGTGCGTGGTTGCCTGTCTATATCAGAGTTGGCATTCCTAACCAGGTCCCAAGGGCTG CATTTATGGCCATGTTTGTTCTGGAGGTGGACCAGTTCATACTGACCCCTCTGACAACCTCCGTTCTGGA CTGTGAGGAGGATGAGACTCCGAAACCCTTGTTGGTGTTCAACATCACTAAAGCCCCACTCCAGGGCTAT GTGACCCACCTGCTGGATCATACCAGACCCATCTCTTCATTCACCTGGAAGGATCTCAGTGACATGCAAG TTGCCTACCAGCCACCAAACAGCAGCCACCCTGAGAGGAGACATTACACGATGGAGCTGGAGGTGTACGA CTTCTTCTTTGAGAGGAGTGCCCCCATCACTGTCCACATCTCCATCAGAACAGCAGACACGAATGCACCA CGGGTGTCTTGGAATACAGGTTTGAATCTCCTAGAGGGGCAGTCTCGGGCCATCACTTGGGAACAATTTC AGATCGTTGACAATGATGACATTGGTGCTGTGCAGTTGGTCACCATTGGTGGCCTGCAGCATGGACGGCT TACAGTACGAGAGGGGAAAGGATTTCTCTTCACCGTGACTGACCTTCAAGCTGGAGTTGTCCGCTATCAT CACGATGACAGTGATACCACCAAAGACTTTGTGGCTTTCAGGATATTCGATGGCCACCACAGCAGCCACC ACAAGTTTCCTATCAACATCTTGCCTAAAGATGACAGCCCCCCATTCCTCATCACCAATGTCGTGATTGA ACTAGAAGAGGGGAAGACCATCTTGATCCAAGGGTCTATGTTGAGAGCTTCAGATATGGACTCCAGTGAT GACTACATCTTCTTTAATATCACAAAGTTTCCACAGGCTGGGGAGATCATGAAGAAGCCAGGGCCAAGAC TGATAGGGTATCCTGTCCCTGGCTTCCTGCAGAGAGACCTGTTCAGTGGAATCATTTACTATCGTCACTT TGGTGGAGAAATCTTTGAAGATTCCTTTGAATTCGTACTGTGGGACAGCCATGAGCCTCCAAATCTCTCA GTGCCACAGGTGGTGACAATTCATATCACTCCAGTAGATGACCAGCTTCCTAAAGAAGCTCCTGGCATTT CCCGGCATTTGGTTGTCAAGGAAACAGAGGTGGCCTACATCACTAAAAAGCACCTACATTTCCTAGACAT GGAATCCCGTGATGGGGAACTCATCTACACAGTAACACGCCCTCCATGTTTCTCCTTCAGCCACAGACAC TTGGATGCTGGGAAGCTATTCATGGTGGACAGCATACCAAAGCTAACCAAAAATCCGACAGCCCCAGGGC TAAGTTCATTTACTCAGGGCTTGATTCTGATCTCTGCAAATCAGCACACGTGTTCATCTCAATTTGCTTC ACAGCATGCCGTGAACCATATGAAAGTGGCCTACATGCCACCCATGCAAGATATAGGCCCCTCCCCTCGA CATGTGCAGTTCACAGTGTCTGTCAGTAACCAGCATGGAGGTGCTTTGCATGGAATCTGCTTCAACATCA CAGTTCTCCCAGTGGACAACCAGGTTCCCGAGGTATTCACCAACACCCTGAGAGTGGTCGAGGGCGGTCA GTGCACCATCAGCACAGAGCACATTTTGGTTTCTGATGTGGACACCCCGCTAGACAGCATCAGCCTCTCT CTTAAGGAGAGGCCTCTGCATGGCGGGGTAGAGCTGGACGGATTTCCTCTAAACCCAAGAGGCACATTTT CTTGGCGAGACCTCAATACCTTAAAAGTTTGGTATCAACATGATGGATCTGAGGTTCTTCAGGATGAGAT ATTTTTGGAGGTCACAGATGGCACAAATTCAGCAGCATTTGTTCTCCACATTGAGGTGTTCCCTGTGAAT GATGAGCCACCCATTCTGAAGGCTGACCTCATCCCCATGATGCACTGCTCTGAGGGTGGAGAGGTGACCA TCACCCCTGAATACATTTCCGCTACTGATGCAGACAGCGATGACTTAGAACTGCTGTTTCTGATTGCCCG AGAGCCTCAGCATGGAGTGGTGAGAAAGGCTGGACTTCACGTGGACAGGTTCTCTCAGGGAGATGTCATC TCAGGGGCTGTGACATACAAACATACAGGTGGCGAGATTGGCCTTGAACCTTGTTCTGACACTGTTGTAT TGGTGGTTTCGGATGGTGAAGCTGACCCTTTGATGAACGGCTGTTGCTACGATGGACCTGATTCATCTGT TCCTCTTCATAAGTCCTTCCCCACATACCAGCTCAACATCACAGTACATCCAGTCGACAACCAGCCACCT TCAATTATAATAGGTAGGATGCTCACAGTGGATGAAGGCTTCTCAGCAGCCCTTACTACTCATCACTTGA CTGTTGTTGATTGGGACACTGCCCCGGATGACTTAAAATTCATGTTGGCTTCTCAGCCCCAGTTTGGCTA CTTAGAAAACGCACTGCCTTCTGCAGGCTTTGAGAAAAGTAACATCGGCATAAGGATAGCCTCATTCCAG TGGACAGACATGAAGGCTTCACACATTAACTATGTGCAGTCCAGGCACCTGAGAGTGGAACCAACTGCTG ACCAGTTCACAGTATATGCCACAGACGGGAAGCATCGCTCCTTGGAGACAACATTTCACGTTATCATCAA CCCCACAAACGATGAAGCTCCTGACCTTGCAGTACAGAACATCACTGTGTATGAGGGGCACATGGTAGAA CTGGATTCTTCCATCATCAGTGCTACTGACAGGGATATTCCCAAGGACCCCTTGCTCTTCAGCATCGCTC TCAAGCCCCAGCACGGCCTGCTCGTCGATGCTGCCATCAGCAAGGACTCCCATCAGATCAAGCAGCTGCA ACACGAAATCCACAGCTTCTCCGTGGACCTTCTCAAGAATGGAATGAAGCTGGTCTATGCCCACGACGAC TCAGAGAGCTCTGCTGATAACTTCGTGATCCAGTTGTCAGACGGGAAACATAAAATCCTTAAAACCATCT CAGTAAACATTACCCCAGTGAATGACGAGACACCAACGCTAAGCAAGAAGGCTGAAATCTCAATGGCTGT GGGCGATACTCGCGTCCTGTCTAGTGCTGTTCTTTCAGCCACAGATAAAGACTCGCCCAGAGAGAAGATT CACTATGTATTTGAAAGACTTCCCCAAAATGGACAACTTCAACTTAAGATAGGGAGGGACTGGGTCCCTC TCTCCACTGGCATGCAGTGCACCCAGGAGGATGTGGACCTGAACTTGCTAAGATACACGCATGCTGGTAA AACGGACTCCCAGGATGGAGACAGCTTCACCTTCTACCTCTGGGATGAGGACAACAGGTCACCTGCATTT GACTGTCACATCATCATTGAAGACATGGGCAAAGGTGATATTGTCATTCATGCAAAACCACTCGTGGTAG TCAAAGGTGACAGAGGTCTCTTGACGACTGCCACCCTTCTGGCTGTGGATGGAGCAGACAAGCCTGAGGA ACTGCTCTACCTCATCACCTCCCCACCACGGCATGGCCAAGTGGAGTACGTCCACTCTCCTGGAGTCCCC ATTGCCAGCTTCAGCCAAATGGACATAGCAGGACAGACAGTGTGCTACATACACAAGAGCAGGACAGCTG TCCCCACTGACAGCTTCAGATTTACCATCAGCAATGGACTGCAGACCCAGCGTGGGGTGTTTGAAATCAC ACTGCAGACTGTGGACAGCGCCTTGCCTGTGCTGACCAAGAACAAAAGGCTGAGGCTAGCCGAAGGGGCC ATGGGCCTCCTGTCCGCTGATCACCTTCAGCTGACTGACCCCGACACACCTCCAGAGAACCTGACCTTCT TTCTGGCTCAGCTCCCACGCCACGGGTACCTCTTCCTGAGAGGGAAAGCACTCCAACACAACTTCACCCA GCGAGATGTGGACAGCGGGGGCGTGGCCTACCAGCACTCAGGAGGCGGCGCCCGGGAGGACTATTTTACT TTTCTAGCCACAGACAGGAAGAACCAAGGCTTTGTTGTGGATGGGAAAGTTCAGAAAGAGCCTGTTCGCT TCACAATCCAGGTGGATCAGCTGGACAAGGCAGCGCCCCGTATCACACACTTGCACTCCCCTACTCAAGT GGGGCTCTTGAAAAATGGCTGCTATGGGATTTACATCACTTCCCGTGTGCTGAAGGCATCAGACCCTGAC ACAGAGGATGACCAGATCATCTTTAAGATTTTACGAGGCCCATTGTACGGACGTCTGGAGAACACAACAA CAGGTGAATTCATCCACGAGCGATTTAGCCAGAAGGACTTAAGCCATAAGACCATCCTTTACATCATAAA CCCTTCTTTGCAAGTGACTTCCGATATCCTGGAATTTCAGGCCATGGACCCCACAGGGAACACTGCCACT CCCCAGAGCTTGGACTTGAGATGGTCGTATATTGAATGGGCCCAGACTGCATATGAGGTTTGTGAGAATG TGGGCTTATTGCCCTTGGAAGTTACCAGAAGGGGATATCCCATGGACTCAGCCTTTGTGGGTGTAGAGGT TAACCAAGTGTCAGCTACAGTTGGAAAAGATTTTACTGTCACTCCATCCAAACTGCTTCAATTTGACCCA GGAATGTCAACTAAGATGTGGAATATAGCAATTACCTATGACGGATTAGAGGAAGATGATGAGGTCTTTG AAGTAATTCTGAACTCCCCTGTGAATGCGGTTCTTGGCACGCAGACAAAAGCGGCGGTGAAAATTTTGGA CTCAAAAGGAGGACGGTGCCATCCTTCAAATTCCTTCAACCAAAGCAAGCACAGCACGTGGGGGAAGGGC CCTTGGCATCCGCTGCCCTCAGGCTCATCCTCGCTCACCACTTCAGGTTCTCCTCTTCTGGAAAGGCCTC CTCCATCTTTCACCAGTGGAGATGCTCTTCAGGGTTTTGGTCTCACCGACCTCACTCAAAGGAAGACAAT GACCCAGGGGAATGGCAAATCAGTTCTCCCATCCTCTGTTTGTAGAAATGGGACAGACACCATCTACAAT TACCATGGTATAGTTTCCTTGAAACTAGAGGGCGACAGATTCTCAGCTCACAAACGGAAGGCCAAAATAT CCATTGTTAGTCAGCCACAGAGGACAATCAAGGTGGCAGAGCTGCCTCTAGCTGATAAGGTGGAATCCAC AACTGATTTGCACTTTCTCAGACAGGGTCTGCGGCCCTTGTTTCCAAAGAATTGTTCTGTGGACTTAAAG GGACTCTTTCATTTTGAAGAAAGCACCCACAGATTGTATCAATGTGATGGGATCTCCTGGAAAGCCTGGA GCCCCCAAACCAAGGGGCTGGAGGACAGATCCTGCCCAGGTGGATGGCTCCTTCATTCTGGCTACTGTCA CATCTTGGTCACAAGACAGAAAGGCACCTGGACCACAGCTACCCGAGCTTGCAGAGAACAGCACCAGGGC GACCTTGTGACCGTACTCTCCAGAAGGCATATGCAGTGGCTATGGGCGATGAGTGGAAGAAAACCCTTCT GGATAGGCTTGAAGAACCAACCGAGGACTGGCCACTGGGAGTGGATCGGAGGTGAACCTGTTGCTTTTAC CAACTGGAGGAGAGGGGCCCCTCTGCACCCAAAACCTGGAAAGAACTGTGCTTTGGTTCAGAAAAGAGGA CAATGGCAGACAAAGAACTGTAGCAAAGGCAAGGCTCACAATTTTGTGTGCTCAAGGAAACTCTGA
Translation (2191 aa): MHSPGCTGPKAQWFLLLQLLLLHLDRVSATFISINRGLRVMKGSSAFLSGDHLRVAVPKEKDACRLEVVM NEPVTQRVGKLSPQVFDCHFLPNEVKYVHNGCPILDEDSVKLRLYRFTETDTFMETFLLRVYLVEPDCNI IRMSSNVLEVTEFYGLSQAIDKNLLQFDYDRTASLDCTIRLDPLRTQLPAHGKLVVVNRKSEGPRGDQPH SFFSETELGAGLKCPDGSCALELKQVASLKVSCEEFLLTGFHYQHMQPPSPNIDYIPIQLDLTDRRSKTV YKSESAWLPVYIRVGIPNQVPRAAFMAMFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITKAPLQGY VTHLLDHTRPISSFTWKDLSDMQVAYQPPNSSHPERRHYTMELEVYDFFFERSAPITVHISIRTADTNAP RVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVTIGGLQHGRLTVREGKGFLFTVTDLQAGVVRYH HDDSDTTKDFVAFRIFDGHHSSHHKFPINILPKDDSPPFLITNVVIELEEGKTILIQGSMLRASDMDSSD DYIFFNITKFPQAGEIMKKPGPRLIGYPVPGFLQRDLFSGIIYYRHFGGEIFEDSFEFVLWDSHEPPNLS VPQVVTIHITPVDDQLPKEAPGISRHLVVKETEVAYITKKHLHFLDMESRDGELIYTVTRPPCFSFSHRH LDAGKLFMVDSIPKLTKNPTAPGLSSFTQGLILISANQHTCSSQFASQHAVNHMKVAYMPPMQDIGPSPR HVQFTVSVSNQHGGALHGICFNITVLPVDNQVPEVFTNTLRVVEGGQCTISTEHILVSDVDTPLDSISLS LKERPLHGGVELDGFPLNPRGTFSWRDLNTLKVWYQHDGSEVLQDEIFLEVTDGTNSAAFVLHIEVFPVN DEPPILKADLIPMMHCSEGGEVTITPEYISATDADSDDLELLFLIAREPQHGVVRKAGLHVDRFSQGDVI SGAVTYKHTGGEIGLEPCSDTVVLVVSDGEADPLMNGCCYDGPDSSVPLHKSFPTYQLNITVHPVDNQPP SIIIGRMLTVDEGFSAALTTHHLTVVDWDTAPDDLKFMLASQPQFGYLENALPSAGFEKSNIGIRIASFQ WTDMKASHINYVQSRHLRVEPTADQFTVYATDGKHRSLETTFHVIINPTNDEAPDLAVQNITVYEGHMVE LDSSIISATDRDIPKDPLLFSIALKPQHGLLVDAAISKDSHQIKQLQHEIHSFSVDLLKNGMKLVYAHDD SESSADNFVIQLSDGKHKILKTISVNITPVNDETPTLSKKAEISMAVGDTRVLSSAVLSATDKDSPREKI HYVFERLPQNGQLQLKIGRDWVPLSTGMQCTQEDVDLNLLRYTHAGKTDSQDGDSFTFYLWDEDNRSPAF DCHIIIEDMGKGDIVIHAKPLVVVKGDRGLLTTATLLAVDGADKPEELLYLITSPPRHGQVEYVHSPGVP IASFSQMDIAGQTVCYIHKSRTAVPTDSFRFTISNGLQTQRGVFEITLQTVDSALPVLTKNKRLRLAEGA MGLLSADHLQLTDPDTPPENLTFFLAQLPRHGYLFLRGKALQHNFTQRDVDSGGVAYQHSGGGAREDYFT FLATDRKNQGFVVDGKVQKEPVRFTIQVDQLDKAAPRITHLHSPTQVGLLKNGCYGIYITSRVLKASDPD TEDDQIIFKILRGPLYGRLENTTTGEFIHERFSQKDLSHKTILYIINPSLQVTSDILEFQAMDPTGNTAT PQSLDLRWSYIEWAQTAYEVCENVGLLPLEVTRRGYPMDSAFVGVEVNQVSATVGKDFTVTPSKLLQFDP GMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTQTKAAVKILDSKGGRCHPSNSFNQSKHSTWGKG PWHPLPSGSSSLTTSGSPLLERPPPSFTSGDALQGFGLTDLTQRKTMTQGNGKSVLPSSVCRNGTDTIYN YHGIVSLKLEGDRFSAHKRKAKISIVSQPQRTIKVAELPLADKVESTTDLHFLRQGLRPLFPKNCSVDLK GLFHFEESTHRLYQCDGISWKAWSPQTKGLEDRSCPGGWLLHSGYCHILVTRQKGTWTTATRACREQHQG DLVTVLSRRHMQWLWAMSGRKPFWIGLKNQPRTGHWEWIGGEPVAFTNWRRGAPLHPKPGKNCALVQKRG QWQTKNCSKGKAHNFVCSRKL
|