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Report for CCDS35320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35320.1 Public Homo sapiens X AWAT2 24 110 108 CCDS HistoryNCBI Gene:158835Re-query CCDS DB by CCDS ID:35320.1Re-query CCDS DB by GeneID:158835See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276101.7 ENSP00000421172.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276101.7Link to Ensembl Protein Viewer:ENSP00000421172.1Re-query CCDS DB by Nucleotide ID:ENST00000276101Re-query CCDS DB by Protein ID:ENSP00000421172
Original member Current member NCBI NM_001002254.1 NP_001002254.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002254.1Link to Protein Sequence:NP_001002254.1Re-query CCDS DB by Nucleotide ID:NM_001002254Re-query CCDS DB by Protein ID:NP_001002254Link to BLAST:NP_001002254.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002254.1 333 Q6E213 333 100% 0 0

Chromosomal Locations for CCDS 35320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70041808 70041962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70042187 70042386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70043069 70043243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70043478 70043682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70043926 70043996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70044352 70044462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70049848 70049932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGCTCTTGCCCTCTAAGAAGGACCTCAAGACTGCCCTGGATGTCTTTGCTGTTTTCCAGTGGTCCTTCA
GTGCCTTGCTTATCACAACCACTGTGATTGCTGTCAACCTCTACCTGGTGGTGTTCACACCATACTGGCC
TGTCACTGTGCTTATTCTTACCTGGCTGGCTTTTGACTGGAAGACCCCTCAGCGAGGCGGCCGCCGGTTT
ACCTGTGTGAGGCACTGGCGCCTGTGGAAACACTACAGCGATTATTTCCCTCTCAAGCTTCTGAAGACTC
ATGACATCTGCCCCAGCCGCAACTACATCCTCGTCTGCCACCCTCATGGGCTCTTTGCCCATGGATGGTT
TGGCCACTTTGCCACAGAGGCCTCAGGCTTCTCCAAGATATTTCCTGGCATCACCCCTTACATACTCACA
CTGGGAGCCTTTTTCTGGATGCCTTTCCTCAGAGAATATGTAATGTCTACAGGGGCCTGCTCTGTGAGTC
GATCCTCCATTGACTTTCTGCTGACTCATAAAGGCACAGGCAACATGGTCATTGTGGTGATTGGTGGACT
GGCTGAGTGCAGATACAGCCTGCCAGGTTCTTCTACCCTGGTGTTGAAGAACCGGTCTGGCTTTGTGCGC
ATGGCCCTTCAGCATGGGGTGCCTCTAATACCTGCCTATGCCTTTGGGGAGACGGACCTCTATGATCAGC
ACATTTTCACTCCTGGTGGCTTTGTCAACCGCTTCCAGAAGTGGTTCCAGAGCATGGTACACATCTACCC
TTGTGCTTTCTATGGACGTGGCTTCACCAAGAACTCCTGGGGCCTTCTGCCCTATAGTCGGCCTGTAACC
ACCATCGTCGGGGAGCCTCTACCAATGCCCAAGATTGAGAATCCAAGCCAGGAGATCGTGGCTAAATATC
ACACACTCTATATTGATGCCCTACGTAAACTGTTTGACCAGCATAAGACCAAGTTTGGTATCTCAGAGAC
CCAGGAGCTGGAGATAATTTGA

Translation (333 aa):
MLLPSKKDLKTALDVFAVFQWSFSALLITTTVIAVNLYLVVFTPYWPVTVLILTWLAFDWKTPQRGGRRF
TCVRHWRLWKHYSDYFPLKLLKTHDICPSRNYILVCHPHGLFAHGWFGHFATEASGFSKIFPGITPYILT
LGAFFWMPFLREYVMSTGACSVSRSSIDFLLTHKGTGNMVIVVIGGLAECRYSLPGSSTLVLKNRSGFVR
MALQHGVPLIPAYAFGETDLYDQHIFTPGGFVNRFQKWFQSMVHIYPCAFYGRGFTKNSWGLLPYSRPVT
TIVGEPLPMPKIENPSQEIVAKYHTLYIDALRKLFDQHKTKFGISETQELEII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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