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Report for CCDS4382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4382.1 Public Homo sapiens 5 RPL26L1 24 110 108 CCDS HistoryNCBI Gene:51121Re-query CCDS DB by CCDS ID:4382.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4382.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265100.6 ENSP00000265100.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265100.6Link to Ensembl Protein Viewer:ENSP00000265100.2Re-query CCDS DB by Nucleotide ID:ENST00000265100Re-query CCDS DB by Protein ID:ENSP00000265100
Original member Current member EBI ENST00000519974.5 ENSP00000428177.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519974.5Link to Ensembl Protein Viewer:ENSP00000428177.1Re-query CCDS DB by Nucleotide ID:ENST00000519974Re-query CCDS DB by Protein ID:ENSP00000428177
Original member Current member EBI ENST00000521476.5 ENSP00000428223.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000521476.5Link to Ensembl Protein Viewer:ENSP00000428223.1Re-query CCDS DB by Nucleotide ID:ENST00000521476Re-query CCDS DB by Protein ID:ENSP00000428223
Original member Current member EBI ENST00000519239.5 ENSP00000430147.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519239.5Link to Ensembl Protein Viewer:ENSP00000430147.1Re-query CCDS DB by Nucleotide ID:ENST00000519239Re-query CCDS DB by Protein ID:ENSP00000430147
Original member Current member NCBI NM_001317980.2 NP_001304909.1 Accepted alive Link to Nucleotide Sequence:NM_001317980.2Link to Protein Sequence:NP_001304909.1Re-query CCDS DB by Nucleotide ID:NM_001317980Re-query CCDS DB by Protein ID:NP_001304909Link to BLAST:NP_001304909.1
Original member Current member NCBI NM_001317981.2 NP_001304910.1 Accepted alive Link to Nucleotide Sequence:NM_001317981.2Link to Protein Sequence:NP_001304910.1Re-query CCDS DB by Nucleotide ID:NM_001317981Re-query CCDS DB by Protein ID:NP_001304910Link to BLAST:NP_001304910.1
Original member Current member NCBI NM_001317982.2 NP_001304911.1 Accepted alive Link to Nucleotide Sequence:NM_001317982.2Link to Protein Sequence:NP_001304911.1Re-query CCDS DB by Nucleotide ID:NM_001317982Re-query CCDS DB by Protein ID:NP_001304911Link to BLAST:NP_001304911.1
Original member Current member NCBI NM_016093.4 NP_057177.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016093.4Link to Protein Sequence:NP_057177.1Re-query CCDS DB by Nucleotide ID:NM_016093Re-query CCDS DB by Protein ID:NP_057177Link to BLAST:NP_057177.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304909.1 145 Q9UNX3 145 100% 0 0
NP_001304910.1 145 Q9UNX3 145 100% 0 0
NP_001304911.1 145 Q9UNX3 145 100% 0 0
NP_057177.1 145 Q9UNX3 145 100% 0 0

Chromosomal Locations for CCDS 4382.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 172959874 172960041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 172968459 172968599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 172969413 172969541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGAAGTTCAATCCCTTCGTTACCTCGGACCGCAGTAAAAACCGCAAACGTCACTTCAATGCCCCCTCAC
ACGTGCGCAGGAAGATCATGTCATCCCCGCTCTCCAAGGAGCTGCGGCAGAAGTACAATGTCCGCTCCAT
GCCCATCCGCAAGGACGACGAGGTCCAGGTAGTTCGAGGACACTACAAAGGTCAGCAAATTGGCAAGGTA
GTCCAGGTGTACAGAAAGAAATATGTCATCTACATCGAGCGGGTGCAGCGTGAGAAGGCCAACGGCACAA
CTGTCCACGTGGGCATTCACCCAAGCAAGGTGGTTATCACCAGGCTAAAACTGGACAAGGATCGGAAAAA
AATTCTTGAACGCAAAGCCAAGTCTCGACAAGTTGGAAAAGAGAAAGGCAAATATAAAGAAGAACTTATT
GAGAAAATGCAGGAATAA

Translation (145 aa):
MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV
VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEELI
EKMQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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