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Report for CCDS5503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5503.1 Public Homo sapiens 7 RAMP3 24 110 108 CCDS HistoryNCBI Gene:10268Re-query CCDS DB by CCDS ID:5503.1Re-query CCDS DB by GeneID:10268See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5503.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242249.8 ENSP00000242249.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242249.8Link to Ensembl Protein Viewer:ENSP00000242249.4Re-query CCDS DB by Nucleotide ID:ENST00000242249Re-query CCDS DB by Protein ID:ENSP00000242249
Original member Current member EBI ENST00000481345.1 ENSP00000419012.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481345.1Link to Ensembl Protein Viewer:ENSP00000419012.1Re-query CCDS DB by Nucleotide ID:ENST00000481345Re-query CCDS DB by Protein ID:ENSP00000419012
Original member Current member NCBI NM_005856.3 NP_005847.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005856.3Link to Protein Sequence:NP_005847.1Re-query CCDS DB by Nucleotide ID:NM_005856Re-query CCDS DB by Protein ID:NP_005847Link to BLAST:NP_005847.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005847.1 148 O60896 148 100% 0 0

Chromosomal Locations for CCDS 5503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45157829 45157886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45177309 45177441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45183157 45183412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGAGACTGGAGCGCTGCGGCGCCCGCAACTTCTCCCGTTGCTGCTGCTGCTCTGCGGTGGGTGTCCCA
GAGCAGGCGGCTGCAACGAGACAGGCATGTTGGAGAGGCTGCCCCTGTGTGGGAAGGCTTTCGCAGACAT
GATGGGCAAGGTGGACGTCTGGAAGTGGTGCAACCTGTCCGAGTTCATCGTGTACTATGAGAGTTTCACC
AACTGCACCGAGATGGAGGCCAATGTCGTGGGCTGCTACTGGCCCAACCCCCTGGCCCAGGGCTTCATCA
CCGGCATCCACAGGCAGTTCTTCTCCAACTGCACCGTGGACAGGGTCCACTTGGAGGACCCCCCAGACGA
GGTTCTCATCCCGCTGATCGTTATACCCGTCGTTCTGACTGTCGCCATGGCTGGCCTGGTGGTGTGGCGC
AGCAAACGCACCGACACGCTGCTGTGA

Translation (148 aa):
METGALRRPQLLPLLLLLCGGCPRAGGCNETGMLERLPLCGKAFADMMGKVDVWKWCNLSEFIVYYESFT
NCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLIPLIVIPVVLTVAMAGLVVWR
SKRTDTLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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