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Report for CCDS4220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4220.1 Public Homo sapiens 5 PURA 24 110 108 CCDS HistoryNCBI Gene:5813Re-query CCDS DB by CCDS ID:4220.1Re-query CCDS DB by GeneID:5813See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4220.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331327.5 ENSP00000332706.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331327.5Link to Ensembl Protein Viewer:ENSP00000332706.3Re-query CCDS DB by Nucleotide ID:ENST00000331327Re-query CCDS DB by Protein ID:ENSP00000332706
Original member Current member EBI ENST00000651386.1 ENSP00000499133.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000651386.1Link to Ensembl Protein Viewer:ENSP00000499133.1Re-query CCDS DB by Nucleotide ID:ENST00000651386Re-query CCDS DB by Protein ID:ENSP00000499133
Original member Current member NCBI NM_005859.5 NP_005850.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005859.5Link to Protein Sequence:NP_005850.1Re-query CCDS DB by Nucleotide ID:NM_005859Re-query CCDS DB by Protein ID:NP_005850Link to BLAST:NP_005850.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005850.1 322 Q00577 322 100% 0 0

Chromosomal Locations for CCDS 4220.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 140114182 140115150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGCGGACCGAGACAGCGGCAGCGAGCAGGGTGGTGCGGCGCTGGGTTCGGGCGGCTCCCTGGGGCACC
CCGGCTCGGGCTCAGGCTCCGGCGGGGGCGGTGGTGGCGGCGGGGGCGGCGGCGGCAGTGGCGGCGGCGG
CGGCGGGGCCCCAGGGGGGCTGCAGCACGAGACGCAGGAGCTGGCCTCCAAGCGGGTGGACATCCAGAAC
AAGCGCTTCTACCTGGACGTGAAGCAGAACGCCAAGGGCCGCTTCCTGAAGATCGCCGAGGTGGGCGCGG
GCGGCAACAAGAGCCGCCTTACTCTCTCCATGTCAGTGGCCGTGGAGTTCCGCGACTACCTGGGCGACTT
CATCGAGCACTACGCGCAGCTGGGCCCCAGCCAGCCGCCGGACCTGGCCCAGGCGCAGGACGAGCCGCGC
CGGGCGCTCAAAAGCGAGTTCCTGGTGCGCGAGAACCGCAAGTACTACATGGATCTCAAGGAGAACCAGC
GCGGCCGCTTCCTGCGCATCCGCCAGACGGTCAACCGGGGGCCTGGCCTGGGCTCCACGCAGGGCCAGAC
CATTGCGCTGCCCGCGCAGGGGCTCATCGAGTTCCGTGACGCTCTGGCCAAGCTCATCGACGACTACGGA
GTGGAGGAGGAGCCGGCCGAGCTGCCCGAGGGCACCTCCTTGACTGTGGACAACAAGCGCTTCTTCTTCG
ATGTGGGCTCCAACAAGTACGGCGTGTTTATGCGAGTGAGCGAGGTGAAGCCCACCTATCGCAACTCCAT
CACCGTGCCCTACAAGGTGTGGGCCAAGTTCGGACACACCTTCTGCAAGTACTCGGAGGAGATGAAGAAG
ATTCAAGAGAAGCAGAGGGAGAAGCGGGCTGCCTGTGAGCAGCTTCACCAGCAGCAACAGCAGCAGCAGG
AGGAGACCGCCGCTGCCACCCTGCTACTGCAGGGTGAGGAAGAAGGGGAAGAAGATTGA

Translation (322 aa):
MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRVDIQN
KRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPR
RALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYG
VEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKK
IQEKQREKRAACEQLHQQQQQQQEETAAATLLLQGEEEGEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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