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Report for CCDS3823.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3823.1 Public Homo sapiens 4 ADAM29 24 110 108 CCDS HistoryNCBI Gene:11086Re-query CCDS DB by CCDS ID:3823.1Re-query CCDS DB by GeneID:11086See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3823.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359240.7 ENSP00000352177.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359240.7Link to Ensembl Protein Viewer:ENSP00000352177.3Re-query CCDS DB by Nucleotide ID:ENST00000359240Re-query CCDS DB by Protein ID:ENSP00000352177
Original member Current member EBI ENST00000404450.8 ENSP00000384229.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404450.8Link to Ensembl Protein Viewer:ENSP00000384229.3Re-query CCDS DB by Nucleotide ID:ENST00000404450Re-query CCDS DB by Protein ID:ENSP00000384229
Original member Current member EBI ENST00000445694.5 ENSP00000414544.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445694.5Link to Ensembl Protein Viewer:ENSP00000414544.1Re-query CCDS DB by Nucleotide ID:ENST00000445694Re-query CCDS DB by Protein ID:ENSP00000414544
Original member Current member EBI ENST00000514159.1 ENSP00000423517.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514159.1Link to Ensembl Protein Viewer:ENSP00000423517.1Re-query CCDS DB by Nucleotide ID:ENST00000514159Re-query CCDS DB by Protein ID:ENSP00000423517
Original member Current member EBI ENST00000618444.1 ENSP00000478469.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618444.1Link to Ensembl Protein Viewer:ENSP00000478469.1Re-query CCDS DB by Nucleotide ID:ENST00000618444Re-query CCDS DB by Protein ID:ENSP00000478469
Original member Current member EBI ENST00000615367.4 ENSP00000484862.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615367.4Link to Ensembl Protein Viewer:ENSP00000484862.1Re-query CCDS DB by Nucleotide ID:ENST00000615367Re-query CCDS DB by Protein ID:ENSP00000484862
Original member Current member NCBI NM_001130703.1 NP_001124175.1 Accepted alive Link to Nucleotide Sequence:NM_001130703.1Link to Protein Sequence:NP_001124175.1Re-query CCDS DB by Nucleotide ID:NM_001130703Re-query CCDS DB by Protein ID:NP_001124175Link to BLAST:NP_001124175.1
Original member Current member NCBI NM_001130704.1 NP_001124176.1 Accepted alive Link to Nucleotide Sequence:NM_001130704.1Link to Protein Sequence:NP_001124176.1Re-query CCDS DB by Nucleotide ID:NM_001130704Re-query CCDS DB by Protein ID:NP_001124176Link to BLAST:NP_001124176.1
Original member Current member NCBI NM_001130705.1 NP_001124177.1 Accepted alive Link to Nucleotide Sequence:NM_001130705.1Link to Protein Sequence:NP_001124177.1Re-query CCDS DB by Nucleotide ID:NM_001130705Re-query CCDS DB by Protein ID:NP_001124177Link to BLAST:NP_001124177.1
Original member Current member NCBI NM_001278125.1 NP_001265054.1 Accepted alive Link to Nucleotide Sequence:NM_001278125.1Link to Protein Sequence:NP_001265054.1Re-query CCDS DB by Nucleotide ID:NM_001278125Re-query CCDS DB by Protein ID:NP_001265054Link to BLAST:NP_001265054.1
Original member Current member NCBI NM_001278126.1 NP_001265055.1 Accepted alive Link to Nucleotide Sequence:NM_001278126.1Link to Protein Sequence:NP_001265055.1Re-query CCDS DB by Nucleotide ID:NM_001278126Re-query CCDS DB by Protein ID:NP_001265055Link to BLAST:NP_001265055.1
Original member Current member NCBI NM_001278127.1 NP_001265056.1 Accepted alive Link to Nucleotide Sequence:NM_001278127.1Link to Protein Sequence:NP_001265056.1Re-query CCDS DB by Nucleotide ID:NM_001278127Re-query CCDS DB by Protein ID:NP_001265056Link to BLAST:NP_001265056.1
Original member Current member NCBI NM_014269.4 NP_055084.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014269.4Link to Protein Sequence:NP_055084.3Re-query CCDS DB by Nucleotide ID:NM_014269Re-query CCDS DB by Protein ID:NP_055084Link to BLAST:NP_055084.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124175.1 820 Q9UKF5-1 820 100% 0 0
NP_001124176.1 820 Q9UKF5-1 820 100% 0 0
NP_001124177.1 820 Q9UKF5-1 820 100% 0 0
NP_001265054.1 820 Q9UKF5-1 820 100% 0 0
NP_001265055.1 820 Q9UKF5-1 820 100% 0 0
NP_001265056.1 820 Q9UKF5-1 820 100% 0 0
NP_055084.3 820 Q9UKF5-1 820 100% 0 0

Chromosomal Locations for CCDS 3823.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 174975526 174977988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2463 nt):
ATGAAGATGTTACTCCTGCTGCATTGCCTTGGGGTGTTTCTGTCCTGTTCTGGACACATCCAGGATGAGC
ACCCCCAATATCACAGCCCTCCGGATGTGGTGATTCCTGTGAGGATAACTGGCACCACCAGAGGCATGAC
ACCTCCAGGCTGGCTCTCCTATATCCTGCCCTTTGGAGGCCAGAAACACATTATCCACATAAAGGTCAAG
AAGCTTTTGTTTTCCAAACACCTCCCTGTGTTCACCTACACAGACCAGGGTGCTATCCTTGAGGACCAGC
CATTTGTCCAGAATAACTGCTACTATCATGGTTATGTGGAAGGGGACCCAGAATCCCTGGTTTCCCTCAG
TACCTGTTTTGGGGGTTTTCAAGGAATATTACAGATAAATGACTTTGCTTATGAAATCAAGCCCCTAGCA
TTTTCTACCACGTTTGAACATCTGGTATACAAGATGGACAGTGAGGAGAAACAATTTTCAACCATGAGAT
CCGGATTTATGCAAAATGAAATAACATGCCGAATGGAATTTGAAGAAATTGATAATTCCACTCAGAAGCA
AAGTTCTTATGTGGGCTGGTGGATCCATTTTAGGATTGTTGAAATTGTAGTCGTCATTGATAATTATCTG
TACATTCGTTATGAAAGGAACGACTCAAAGTTGCTGGAGGATCTATATGTTATTGTTAATATAGTGGATT
CCATTTTGGATGTCATTGGTGTTAAGGTGTTATTATTTGGTTTGGAGATCTGGACCAATAAAAACCTCAT
TGTAGTAGATGATGTAAGGAAATCTGTGCACCTGTATTGCAAGTGGAAGTCGGAGAACATTACGCCCCGG
ATGCAACATGACACCTCACATCTTTTCACAACTCTAGGATTAAGAGGGTTAAGTGGCATAGGAGCTTTTA
GAGGAATGTGTACACCACACCGTAGTTGTGCAATTGTTACTTTCATGAACAAAACTTTGGGCACTTTTTC
AATTGCAGTGGCTCATCATCTAGGTCATAATTTGGGCATGAACCATGATGAGGATACATGTCGTTGTTCA
CAACCTAGATGCATAATGCATGAAGGCAACCCACCAATAACTAAATTTAGCAATTGTAGTTATGGTGATT
TTTGGGAATATACTGTAGAGAGGACAAAGTGTTTGCTTGAAACAGTACACACAAAGGACATCTTTAATGT
GAAGCGCTGTGGGAATGGTGTTGTTGAAGAAGGAGAAGAGTGTGACTGTGGACCTTTAAAGCATTGTGCA
AAAGATCCCTGCTGTCTGTCAAATTGCACTCTGACTGATGGTTCTACTTGTGCTTTTGGGCTTTGTTGCA
AAGACTGCAAGTTCCTACCATCAGGGAAAGTGTGTAGAAAGGAGGTCAATGAATGTGATCTTCCAGAGTG
GTGCAATGGTACTTCCCATAAGTGCCCAGATGACTTTTATGTGGAAGATGGAATTCCCTGTAAGGAGAGG
GGCTACTGCTATGAAAAGAGCTGTCATGACCGCAATGAACAGTGTAGGAGGATTTTTGGTGCAGGCGCAA
ATACTGCAAGTGAGACTTGCTACAAAGAATTGAACACCTTAGGTGACCGTGTTGGTCACTGTGGTATCAA
AAATGCTACATATATAAAGTGTAATATCTCAGATGTCCAGTGTGGAAGAATTCAGTGTGAGAATGTGACA
GAAATTCCCAATATGAGTGATCATACTACTGTGCATTGGGCTCGCTTCAATGACATAATGTGCTGGAGTA
CTGATTACCATTTGGGGATGAAGGGACCTGATATTGGTGAAGTGAAAGATGGAACAGAGTGTGGGATAGA
TCATATATGCATCCACAGGCACTGTGTCCATATAACCATCTTGAATAGTAATTGCTCACCTGCATTTTGT
AACAAGAGGGGCATCTGCAACAATAAACATCACTGCCATTGCAATTATCTGTGGGACCCTCCCAACTGCC
TGATAAAAGGCTATGGAGGTAGTGTTGACAGTGGCCCACCCCCTAAGAGAAAGAAGAAAAAGAAGTTCTG
TTATCTGTGTATATTGTTGCTTATTGTTTTGTTTATTTTATTATGTTGTCTTTATCGACTTTGTAAAAAA
AGTAAACCAATAAAAAAGCAGCAAGATGTTCAAACTCCATCTGCAAAAGAAGAGGAAAAAATTCAGCGTC
GACCTCATGAGTTACCTCCCCAGAGTCAACCTTGGGTGATGCCTTCCCAGAGTCAACCTCCTGTGACGCC
TTCCCAGAGTCATCCTCAGGTGATGCCTTCCCAGAGTCAACCTCCTGTGACACCCTCCCAGAGTCAACCT
CGGGTGATGCCTTCTCAGAGTCAACCTCCTGTGATGCCTTCCCAGAGTCATCCTCAGTTGACGCCTTCCC
AGAGTCAACCTCCTGTGACACCCTCCCAGAGGCAACCTCAGTTGATGCCTTCCCAGAGTCAACCTCCTGT
GACGCCCTCCTAG

Translation (820 aa):
MKMLLLLHCLGVFLSCSGHIQDEHPQYHSPPDVVIPVRITGTTRGMTPPGWLSYILPFGGQKHIIHIKVK
KLLFSKHLPVFTYTDQGAILEDQPFVQNNCYYHGYVEGDPESLVSLSTCFGGFQGILQINDFAYEIKPLA
FSTTFEHLVYKMDSEEKQFSTMRSGFMQNEITCRMEFEEIDNSTQKQSSYVGWWIHFRIVEIVVVIDNYL
YIRYERNDSKLLEDLYVIVNIVDSILDVIGVKVLLFGLEIWTNKNLIVVDDVRKSVHLYCKWKSENITPR
MQHDTSHLFTTLGLRGLSGIGAFRGMCTPHRSCAIVTFMNKTLGTFSIAVAHHLGHNLGMNHDEDTCRCS
QPRCIMHEGNPPITKFSNCSYGDFWEYTVERTKCLLETVHTKDIFNVKRCGNGVVEEGEECDCGPLKHCA
KDPCCLSNCTLTDGSTCAFGLCCKDCKFLPSGKVCRKEVNECDLPEWCNGTSHKCPDDFYVEDGIPCKER
GYCYEKSCHDRNEQCRRIFGAGANTASETCYKELNTLGDRVGHCGIKNATYIKCNISDVQCGRIQCENVT
EIPNMSDHTTVHWARFNDIMCWSTDYHLGMKGPDIGEVKDGTECGIDHICIHRHCVHITILNSNCSPAFC
NKRGICNNKHHCHCNYLWDPPNCLIKGYGGSVDSGPPPKRKKKKKFCYLCILLLIVLFILLCCLYRLCKK
SKPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQP
RVMPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMPSQSQPPVTPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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