NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7416.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7416.1 Public Homo sapiens 10 PPP1R3C 24 110 108 CCDS HistoryNCBI Gene:5507Re-query CCDS DB by CCDS ID:7416.1Re-query CCDS DB by GeneID:5507See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7416.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000238994.6 ENSP00000238994.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000238994.6Link to Ensembl Protein Viewer:ENSP00000238994.5Re-query CCDS DB by Nucleotide ID:ENST00000238994Re-query CCDS DB by Protein ID:ENSP00000238994
Original member Current member NCBI NM_005398.7 NP_005389.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005398.7Link to Protein Sequence:NP_005389.1Re-query CCDS DB by Nucleotide ID:NM_005398Re-query CCDS DB by Protein ID:NP_005389Link to BLAST:NP_005389.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005389.1 317 Q9UQK1 317 100% 0 0

Chromosomal Locations for CCDS 7416.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 91629927 91630866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91632956 91632969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGAGCTGCACCAGAATGATCCAGGTTTTAGATCCACGTCCTTTGACAAGTTCGGTCATGCCCGTGGATG
TGGCCATGAGGCTTTGCTTGGCACATTCACCACCTGTGAAGAGTTTCCTGGGCCCGTACGATGAATTTCA
ACGACGACATTTTGTGAATAAATTAAAGCCCCTGAAATCATGTCTCAATATAAAACACAAAGCCAAATCA
CAGAATGACTGGAAGTGCTCACACAACCAAGCCAAGAAGCGCGTTGTGTTTGCTGACTCCAAGGGCCTCT
CTCTCACTGCGATCCATGTCTTCTCCGACCTCCCAGAAGAACCAGCGTGGGATCTGCAGTTTGATCTCTT
GGACCTTAATGATATCTCCTCTGCCTTAAAACACCACGAGGAGAAAAACTTGATTTTAGATTTCCCTCAG
CCTTCAACCGATTACTTAAGTTTCCGGAGCCACTTTCAGAAGAACTTTGTCTGTCTGGAGAACTGCTCGT
TGCAAGAGCGAACAGTGACAGGGACTGTTAAAGTCAAAAATGTGAGTTTTGAGAAGAAAGTTCAGATCCG
TATCACTTTCGATTCTTGGAAAAACTACACTGACGTAGACTGTGTCTATATGAAAAATGTGTATGGTGGC
ACAGATAGTGATACCTTCTCATTTGCCATTGACTTACCCCCTGTCATTCCAACTGAGCAGAAAATTGAGT
TCTGCATTTCTTACCATGCTAATGGGCAAGTCTTTTGGGACAACAATGATGGTCAGAATTATAGAATTGT
TCATGTTCAATGGAAGCCTGATGGGGTGCAGACACAGATGGCACCCCAGGACTGTGCATTCCACCAGACG
TCTCCTAAGACAGAGTTAGAGTCAACAATCTTTGGCAGTCCGAGGCTGGCTAGTGGGCTCTTCCCAGAGT
GGCAGAGCTGGGGGAGAATGGAGAACTTGGCCTCTTATCGATGA

Translation (317 aa):
MSCTRMIQVLDPRPLTSSVMPVDVAMRLCLAHSPPVKSFLGPYDEFQRRHFVNKLKPLKSCLNIKHKAKS
QNDWKCSHNQAKKRVVFADSKGLSLTAIHVFSDLPEEPAWDLQFDLLDLNDISSALKHHEEKNLILDFPQ
PSTDYLSFRSHFQKNFVCLENCSLQERTVTGTVKVKNVSFEKKVQIRITFDSWKNYTDVDCVYMKNVYGG
TDSDTFSFAIDLPPVIPTEQKIEFCISYHANGQVFWDNNDGQNYRIVHVQWKPDGVQTQMAPQDCAFHQT
SPKTELESTIFGSPRLASGLFPEWQSWGRMENLASYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH