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Report for CCDS9961.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9961.1 Public Homo sapiens 14 WARS1 24 110 108 CCDS HistoryNCBI Gene:7453Re-query CCDS DB by CCDS ID:9961.1Re-query CCDS DB by GeneID:7453See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9961.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344102.9 ENSP00000339485.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344102.9Link to Ensembl Protein Viewer:ENSP00000339485.5Re-query CCDS DB by Nucleotide ID:ENST00000344102Re-query CCDS DB by Protein ID:ENSP00000339485
Original member Current member EBI ENST00000358655.8 ENSP00000351481.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358655.8Link to Ensembl Protein Viewer:ENSP00000351481.4Re-query CCDS DB by Nucleotide ID:ENST00000358655Re-query CCDS DB by Protein ID:ENSP00000351481
Original member Current member EBI ENST00000556645.5 ENSP00000451887.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000556645.5Link to Ensembl Protein Viewer:ENSP00000451887.1Re-query CCDS DB by Nucleotide ID:ENST00000556645Re-query CCDS DB by Protein ID:ENSP00000451887
Original member Current member NCBI NM_213645.2 NP_998810.1 Accepted alive Link to Nucleotide Sequence:NM_213645.2Link to Protein Sequence:NP_998810.1Re-query CCDS DB by Nucleotide ID:NM_213645Re-query CCDS DB by Protein ID:NP_998810Link to BLAST:NP_998810.1
Original member Current member NCBI NM_213646.2 NP_998811.1 Accepted alive Link to Nucleotide Sequence:NM_213646.2Link to Protein Sequence:NP_998811.1Re-query CCDS DB by Nucleotide ID:NM_213646Re-query CCDS DB by Protein ID:NP_998811Link to BLAST:NP_998811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_998810.1 430 P23381-2 430 100% 0 0
NP_998811.1 430 P23381-2 430 100% 0 0

Chromosomal Locations for CCDS 9961.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 100334875 100335036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100337062 100337202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100342398 100342571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100343275 100343387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100346746 100346846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100353687 100353869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100354447 100354566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100360554 100360662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100361708 100361897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGTTGGTGTCATTAAAAATGAGCTACAAAGCTGCCGCGGGGGAGGATTACAAGGCTGACTGTCCTCCAG
GGAACCCAGCACCTACCAGTAATCATGGCCCAGATGCCACAGAAGCTGAAGAGGATTTTGTGGACCCATG
GACAGTACAGACAAGCAGTGCAAAAGGCATAGACTACGATAAGCTCATTGTTCGGTTTGGAAGTAGTAAA
ATTGACAAAGAGCTAATAAACCGAATAGAGAGAGCCACCGGCCAAAGACCACACCACTTCCTGCGCAGAG
GCATCTTCTTCTCACACAGAGATATGAATCAGGTTCTTGATGCCTATGAAAATAAGAAGCCATTTTATCT
GTACACGGGCCGGGGCCCCTCTTCTGAAGCAATGCATGTAGGTCACCTCATTCCATTTATTTTCACAAAG
TGGCTCCAGGATGTATTTAACGTGCCCTTGGTCATCCAGATGACGGATGACGAGAAGTATCTGTGGAAGG
ACCTGACCCTGGACCAGGCCTATAGCTATGCTGTGGAGAATGCCAAGGACATCATCGCCTGTGGCTTTGA
CATCAACAAGACTTTCATATTCTCTGACCTGGACTACATGGGGATGAGCTCAGGTTTCTACAAAAATGTG
GTGAAGATTCAAAAGCATGTTACCTTCAACCAAGTGAAAGGCATTTTCGGCTTCACTGACAGCGACTGCA
TTGGGAAGATCAGTTTTCCTGCCATCCAGGCTGCTCCCTCCTTCAGCAACTCATTCCCACAGATCTTCCG
AGACAGGACGGATATCCAGTGCCTTATCCCATGTGCCATTGACCAGGATCCTTACTTTAGAATGACAAGG
GACGTCGCCCCCAGGATCGGCTATCCTAAACCAGCCCTGCTGCACTCCACCTTCTTCCCAGCCCTGCAGG
GCGCCCAGACCAAAATGAGTGCCAGCGACCCCAACTCCTCCATCTTCCTCACCGACACGGCCAAGCAGAT
CAAAACCAAGGTCAATAAGCATGCGTTTTCTGGAGGGAGAGACACCATCGAGGAGCACAGGCAGTTTGGG
GGCAACTGTGATGTGGACGTGTCTTTCATGTACCTGACCTTCTTCCTCGAGGACGACGACAAGCTCGAGC
AGATCAGGAAGGATTACACCAGCGGAGCCATGCTCACCGGTGAGCTCAAGAAGGCACTCATAGAGGTTCT
GCAGCCCTTGATCGCAGAGCACCAGGCCCGGCGCAAGGAGGTCACGGATGAGATAGTGAAAGAGTTCATG
ACTCCCCGGAAGCTGTCCTTCGACTTTCAGTAG

Translation (430 aa):
MLVSLKMSYKAAAGEDYKADCPPGNPAPTSNHGPDATEAEEDFVDPWTVQTSSAKGIDYDKLIVRFGSSK
IDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTK
WLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNV
VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTR
DVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFG
GNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFM
TPRKLSFDFQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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