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Report for CCDS30318.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30318.1 Public Mus musculus X Ogt 23 108 98 CCDS HistoryNCBI Gene:108155Re-query CCDS DB by CCDS ID:30318.1Re-query CCDS DB by GeneID:108155See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30318.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044475.4 ENSMUSP00000045409.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044475.4Link to Ensembl Protein Viewer:ENSMUSP00000045409.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000044475Re-query CCDS DB by Protein ID:ENSMUSP00000045409
Original member Current member NCBI NM_139144.4 NP_631883.2 Accepted alive Link to Nucleotide Sequence:NM_139144.4Link to Protein Sequence:NP_631883.2Re-query CCDS DB by Nucleotide ID:NM_139144Re-query CCDS DB by Protein ID:NP_631883Link to BLAST:NP_631883.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631883.2 1046 Q8CGY8-1 1046 100% 0 0

Chromosomal Locations for CCDS 30318.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101640286 101640322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101642976 101643156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101643947 101644190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101652140 101652208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101655624 101655740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101661252 101661331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101663359 101663554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101663843 101663983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101664644 101664744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101667278 101667431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101667516 101667617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101667980 101668159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101669757 101669915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101670031 101670120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101672448 101672573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101673043 101673213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101673323 101673439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101673542 101673712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101676149 101676301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101678709 101678961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101679224 101679347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101682156 101682330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3141 nt):
ATGGCGTCTTCCGTGGGCAACGTGGCCGACAGTACAGAACCAACGAAACGTATGCTTTCCTTCCAAGGGT
TAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCT
CTGGAGACAAGAGCCTGACAATACTGGTGTTCTTTTATTACTTTCATCTATACACTTCCAGTGTCGAAGG
CTGGACAGATCTGCTCATTTTAGCACCTTGGCAATTAAACAGAATCCCCTTCTAGCAGAAGCCTATTCGA
ATTTGGGAAATGTGTACAAGGAAAGAGGGCAGTTGCAGGAAGCAATCGAGCATTATCGACATGCCTTGCG
GCTGAAGCCTGATTTCATTGATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAA
GGAGCAGTACAAGCCTATGTCTCTGCTCTTCAGTACAATCCTGATTTGTACTGTGTTCGCAGTGACCTGG
GGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGCATGTTATTTGAAAGCAATTGAGACGCA
ACCAAACTTTGCAGTAGCCTGGAGTAATCTCGGCTGTGTTTTCAATGCACAAGGGGAGATTTGGCTGGCT
ATTCATCACTTTGAAAAGGCTGTCACCCTTGACCCAAATTTTCTGGATGCTTATATCAATTTAGGAAATG
TCTTGAAAGAGGCACGCATTTTTGACAGAGCTGTCGCAGCTTATCTTCGTGCCTTAAGTTTGAGCCCAAA
TCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGTACTACGAGCAAGGCCTAATAGACCTGGCCATTGAT
ACCTACAGGAGAGCTATCGAACTGCAACCCCATTTCCCCGATGCTTACTGCAACCTAGCAAATGCTCTCA
AAGAGAAGGGCAGTGTTGCTGAAGCAGAAGATTGTTATAACACAGCTCTTCGTCTGTGTCCTACTCATGC
AGACTCTTTGAATAACCTTGCCAACATCAAACGGGAACAGGGCAACATTGAAGAGGCAGTTCGCCTGTAT
CGCAAAGCATTAGAAGTCTTCCCAGAGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACTGCAACAGC
AGGGCAAGCTGCAGGAAGCACTGATGCACTATAAAGAAGCCATACGAATTAGTCCTACATTTGCTGATGC
TTATTCCAATATGGGAAACACTCTAAAGGAGATGCAGGATGTGCAGGGCGCTTTGCAGTGTTATACTCGT
GCCATCCAGATTAATCCTGCCTTTGCTGATGCACACAGCAATCTGGCCTCCATTCACAAGGATTCAGGGA
ATATCCCAGAAGCAATAGCTTCTTACCGCACAGCTCTGAAACTTAAGCCTGACTTTCCTGATGCTTATTG
TAACTTGGCTCATTGCCTACAGATTGTCTGTGATTGGACAGACTATGATGAGCGGATGAAGAAATTGGTT
AGTATTGTAGCTGAGCAGCTAGAGAAGAATAGACTGCCTTCTGTCCATCCTCACCATAGCATGCTGTACC
CTCTTTCCCATGGCTTCAGGAAGGCTATTGCAGAGAGGCATGGGAATCTCTGCTTGGATAAGATTAATGT
CCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGCGTGTAGGCTAT
GTGAGTTCTGACTTCGGGAATCACCCTACTTCACACCTTATGCAGTCTATTCCAGGCATGCATAATCCTG
ATAAGTTTGAGGTATTCTGCTATGCCTTGAGCCCGGATGATGGTACAAACTTTCGAGTGAAGGTGATGGC
GGAAGCCAATCATTTCATTGATCTTTCTCAGATTCCTTGTAATGGAAAAGCAGCCGACCGCATCCACCAA
GATGGAATTCACATCCTTGTGAATATGAATGGGTATACCAAGGGTGCTCGGAATGAGCTCTTTGCTCTTA
GGCCAGCTCCTATTCAGGCCATGTGGCTGGGCTACCCTGGGACTAGTGGTGCACTGTTCATGGATTACAT
CATCACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAGAAACTGGCTTATATGCCC
CATACTTTCTTTATTGGTGATCATGCTAATATGTTCCCTCACCTGAAGAAAAAAGCAGTCATCGATTTTA
AATCCAATGGGCACATTTATGATAATCGGATAGTTCTGAATGGCATCGATCTCAAAGCATTTCTCGATAG
CCTACCCGATGTGAAGATTGTCAAGATGAAATGTCCTGATGGAGGTGACAATCCAGACAGCAGTAACACA
GCTCTTAATATGCCCGTTATTCCCATGAATACGATTGCAGAAGCAGTAATTGAAATGATTAACAGAGGGC
AGATTCAGATAACAATTAACGGATTCAGTATTAGCAATGGACTGGCGACTACACAGATTAATAATAAGGC
TGCAACCGGAGAGGAAGTTCCCCGTACCATTATTGTAACCACCCGTTCCCAGTATGGGCTACCAGAAGAT
GCCATTGTGTACTGTAACTTTAATCAGTTATATAAAATTGACCCATCTACCCTGCAGATGTGGGCAAATA
TTCTGAAACGTGTGCCTAACAGCGTGCTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAATATTCA
ACAATATGCACAAAATATGGGCCTTCCCCAGAACCGTATCATTTTCTCACCTGTGGCTCCTAAAGAGGAG
CATGTCAGGAGAGGTCAGCTGGCTGATGTCTGCCTGGATACTCCTTTGTGTAATGGACACACCACAGGGA
TGGATGTTCTCTGGGCAGGAACACCCATGGTGACTATGCCAGGAGAGACTCTTGCCTCTCGAGTTGCAGC
TTCTCAGCTTACTTGTCTAGGATGTCTCGAGCTCATTGCTAAAAGCAGACAGGAATATGAAGACATAGCT
GTGAAACTGGGAACCGATCTAGAATACCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGAGAATATCTA
GCCCTCTGTTCAACACCAAACAATACACAATGGAATTAGAGCGACTTTATCTGCAGATGTGGGAGCATTA
TGCAGCTGGCAACAAACCTGACCACATGATTAAGCCTGTTGAAGTCACCGAGTCAGCCTGA

Translation (1046 aa):
MASSVGNVADSTEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRR
LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDME
GAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLA
IHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID
TYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLY
RKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTR
AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLV
SIVAEQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGY
VSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEANHFIDLSQIPCNGKAADRIHQ
DGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMP
HTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNPDSSNT
ALNMPVIPMNTIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPED
AIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEE
HVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIA
VKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHMIKPVEVTESA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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