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Report for CCDS40750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40750.1 Public Mus musculus 9 Acp3 23 108 98 CCDS HistoryNCBI Gene:56318Re-query CCDS DB by CCDS ID:40750.1Re-query CCDS DB by GeneID:56318See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40750.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112590.2 ENSMUSP00000108209.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112590.2Link to Ensembl Protein Viewer:ENSMUSP00000108209.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112590Re-query CCDS DB by Protein ID:ENSMUSP00000108209
Original member Current member NCBI NM_019807.2 NP_062781.2 Accepted alive Link to Nucleotide Sequence:NM_019807.2Link to Protein Sequence:NP_062781.2Re-query CCDS DB by Nucleotide ID:NM_019807Re-query CCDS DB by Protein ID:NP_062781Link to BLAST:NP_062781.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062781.2 381 Q8CE08-1 381 100% 0 0

Chromosomal Locations for CCDS 40750.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 104300458 104300468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104300816 104300985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104306885 104306988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104309410 104309492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104314308 104314440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104316226 104316318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104319974 104320072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104324052 104324204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104324643 104324729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104326881 104326976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104337543 104337659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGCGAGCCGTTCCTCTGCCCCTGAGCCGGACAGCAAGCCTCAGCCTTGGCTTCTTGCTCCTGCTTTCTC
TCTGCCTGGACCCAGGCCAAGCCAAGGAGTTGAAGTTTGTGACATTGGTGTTTCGGCATGGAGACCGAGG
TCCCATCGAGACCTTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACC
CAGTGGGGCATGGAACAGCACTACGAACTTGGAAGTTATATAAGGAAAAGATACGGAAGATTCTTGAACG
ACACCTATAAGCATGATCAGATTTATATCCGGAGCACAGATGTGGACAGGACTTTGATGAGTGCTATGAC
AAACCTTGCAGCCCTGTTTCCTCCAGAGGGGATCAGCATCTGGAATCCTAGACTGCTCTGGCAGCCCATC
CCAGTGCACACCGTGTCTCTCTCTGAGGATCGGTTGCTGTACCTGCCTTTCAGAGACTGCCCTCGTTTTG
AAGAACTCAAGAGTGAGACTTTAGAATCTGAGGAATTCTTGAAGAGGCTTCATCCATATAAAAGCTTCCT
GGACACCTTGTCGTCGCTGTCGGGATTCGATGACCAGGATCTTTTTGGAATCTGGAGTAAAGTTTATGAC
CCTTTATTCTGCGAGAGTGTTCACAATTTCACCTTGCCCTCCTGGGCCACCGAGGACGCCATGATTAAGT
TGAAAGAGCTATCAGAATTATCTCTGCTATCACTTTATGGAATTCACAAGCAGAAAGAGAAATCTCGACT
CCAAGGGGGCGTCCTGGTCAATGAAATCCTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAGTATAAA
AAGCTGGTCATGTATTCCGCACACGACACTACCGTGAGTGGCCTGCAGATGGCGCTAGATGTTTATAATG
GAGTTCTGCCTCCCTACGCTTCTTGCCACATGATGGAATTGTACCATGATAAGGGGGGGCACTTTGTGGA
GATGTACTATCGGAATGAGACCCAGAACGAGCCCTACCCACTCACGCTGCCAGGCTGCACCCACAGCTGC
CCTCTGGAGAAGTTTGCGGAGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCA
CAAGCAGCCACCAAGGACGGAATTAA

Translation (381 aa):
MRAVPLPLSRTASLSLGFLLLLSLCLDPGQAKELKFVTLVFRHGDRGPIETFPTDPITESSWPQGFGQLT
QWGMEQHYELGSYIRKRYGRFLNDTYKHDQIYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPI
PVHTVSLSEDRLLYLPFRDCPRFEELKSETLESEEFLKRLHPYKSFLDTLSSLSGFDDQDLFGIWSKVYD
PLFCESVHNFTLPSWATEDAMIKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKYK
KLVMYSAHDTTVSGLQMALDVYNGVLPPYASCHMMELYHDKGGHFVEMYYRNETQNEPYPLTLPGCTHSC
PLEKFAELLDPVISQDWATECMATSSHQGRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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