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Report for CCDS2746.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2746.1 Public Homo sapiens 3 MYL3 24 110 108 CCDS HistoryNCBI Gene:4634Re-query CCDS DB by CCDS ID:2746.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2746.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292327.6 ENSP00000292327.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292327.6Link to Ensembl Protein Viewer:ENSP00000292327.4Re-query CCDS DB by Nucleotide ID:ENST00000292327Re-query CCDS DB by Protein ID:ENSP00000292327
Original member Current member EBI ENST00000395869.5 ENSP00000379210.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395869.5Link to Ensembl Protein Viewer:ENSP00000379210.1Re-query CCDS DB by Nucleotide ID:ENST00000395869Re-query CCDS DB by Protein ID:ENSP00000379210
Original member Current member EBI ENST00000654597.1 ENSP00000499406.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000654597.1Link to Ensembl Protein Viewer:ENSP00000499406.1Re-query CCDS DB by Nucleotide ID:ENST00000654597Re-query CCDS DB by Protein ID:ENSP00000499406
Original member Current member EBI ENST00000662933.1 ENSP00000499577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000662933.1Link to Ensembl Protein Viewer:ENSP00000499577.1Re-query CCDS DB by Nucleotide ID:ENST00000662933Re-query CCDS DB by Protein ID:ENSP00000499577
Original member Current member EBI ENST00000653454.1 ENSP00000499624.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000653454.1Link to Ensembl Protein Viewer:ENSP00000499624.1Re-query CCDS DB by Nucleotide ID:ENST00000653454Re-query CCDS DB by Protein ID:ENSP00000499624
Original member Current member NCBI NM_000258.3 NP_000249.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000258.3Link to Protein Sequence:NP_000249.1Re-query CCDS DB by Nucleotide ID:NM_000258Re-query CCDS DB by Protein ID:NP_000249Link to BLAST:NP_000249.1
Current member NCBI NM_001406937.1 NP_001393866.1 Accepted alive Link to Nucleotide Sequence:NM_001406937.1Link to Protein Sequence:NP_001393866.1Re-query CCDS DB by Nucleotide ID:NM_001406937Re-query CCDS DB by Protein ID:NP_001393866Link to BLAST:NP_001393866.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000249.1 195 P08590 195 100% 0 0
NP_001393866.1 195 P08590 195 100% 0 0

Chromosomal Locations for CCDS 2746.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 46858244 46858272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46858384 46858461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46859475 46859648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46860676 46860825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46860960 46860987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46863262 46863390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGGCCCCCAAAAAGCCAGAGCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGGCAGCTCCAGCTCCCG
CACCTCCCCCTGAGCCTGAGCGCCCTAAGGAGGTCGAGTTTGATGCTTCCAAGATCAAGATTGAGTTCAC
ACCTGAGCAGATTGAAGAGTTCAAGGAAGCCTTCATGCTGTTCGACCGCACACCCAAGTGTGAGATGAAG
ATCACCTACGGGCAGTGTGGGGATGTCCTGCGGGCGCTGGGCCAGAACCCCACACAGGCAGAAGTGCTCC
GTGTCCTGGGGAAGCCAAGACAGGAAGAGCTCAATACCAAGATGATGGACTTTGAAACTTTCCTGCCTAT
GCTCCAGCACATTTCCAAGAACAAGGACACAGGCACCTATGAGGACTTCGTGGAGGGGCTGCGGGTCTTC
GACAAGGAGGGCAATGGCACTGTCATGGGTGCTGAGCTTCGCCACGTGCTGGCCACGCTGGGTGAGAGGC
TGACAGAAGACGAAGTGGAGAAGTTGATGGCTGGGCAAGAGGACTCCAATGGCTGCATCAACTATGAAGC
ATTTGTGAAGCACATCATGTCCAGCTAA

Translation (195 aa):
MAPKKPEPKKDDAKAAPKAAPAPAPPPEPERPKEVEFDASKIKIEFTPEQIEEFKEAFMLFDRTPKCEMK
ITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVF
DKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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