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Report for CCDS20611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20611.1 Public Mus musculus 6 Tas2r104 23 108 98 CCDS HistoryNCBI Gene:387340Re-query CCDS DB by CCDS ID:20611.1Re-query CCDS DB by GeneID:387340See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20611.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072404.2 ENSMUSP00000072237.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072404.2Link to Ensembl Protein Viewer:ENSMUSP00000072237.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000072404Re-query CCDS DB by Protein ID:ENSMUSP00000072237
Original member Current member NCBI NM_207011.1 NP_996894.1 Accepted alive Link to Nucleotide Sequence:NM_207011.1Link to Protein Sequence:NP_996894.1Re-query CCDS DB by Nucleotide ID:NM_207011Re-query CCDS DB by Protein ID:NP_996894Link to BLAST:NP_996894.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996894.1 302 Q7M723 302 100% 0 0

Chromosomal Locations for CCDS 20611.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 131684836 131685744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGCTGAGTGCACTGGAAAGCATCCTTCTTTCTGTTGCCACTAGTGAAGCCATGCTGGGAGTTTTAGGGA
ACACATTTATTGTACTTGTAAACTACACAGACTGGGTCAGGAATAAGAAACTCTCTAAGATTAACTTTAT
TCTCACTGGCTTAGCAATTTCCAGGATTTTTACCATATGGATAATAACTTTAGATGCATATACAAAGGTT
TTCCTTCTGACTATGCTTATGCCGAGCAGTCTACATGAATGCATGAGTTACATATGGGTAATTATTAACC
ATCTGAGCGTTTGGTTTAGCACCAGCCTCGGCATCTTTTATTTTCTGAAGATAGCAAATTTTTCCCACTA
CATATTTCTCTGGATGAAGAGAAGAGCTGATAAAGTTTTTGTCTTTCTAATTGTATTCTTAATTATAACG
TGGCTAGCTTCCTTTCCGCTAGCTGTGAAGGTCATTAAAGATGTTAAAATATATCAGAGCAACACATCCT
GGCTGATCCACCTGGAGAAGAGTGAGTTACTTATAAACTATGTTTTTGCCAATATGGGGCCCATTTCCCT
CTTTATTGTAGCCATAATTGCTTGTTTCTTGTTAACCATTTCCCTTTGGAGACACAGCAGGCAGATGCAA
TCCATTGGATCAGGATTCAGAGATCTCAACACAGAAGCTCACATGAAAGCCATGAAAGTTTTAATTGCAT
TTATCATCCTCTTTATCTTATATTTTTTGGGTATTCTCATAGAAACATTATGCTTGTTTCTTACAAACAA
TAAACTTCTCTTTATTTTTGGCTTCACTTTGTCAGCCATGTATCCCTGTTGCCATTCCTTTATCCTAATT
CTAACAAGCAGGGAGCTGAAGCAAGCCACTATGAGGGCACTGCAGAGATTAAAATGCTGTGAGACTTGA

Translation (302 aa):
MLSALESILLSVATSEAMLGVLGNTFIVLVNYTDWVRNKKLSKINFILTGLAISRIFTIWIITLDAYTKV
FLLTMLMPSSLHECMSYIWVIINHLSVWFSTSLGIFYFLKIANFSHYIFLWMKRRADKVFVFLIVFLIIT
WLASFPLAVKVIKDVKIYQSNTSWLIHLEKSELLINYVFANMGPISLFIVAIIACFLLTISLWRHSRQMQ
SIGSGFRDLNTEAHMKAMKVLIAFIILFILYFLGILIETLCLFLTNNKLLFIFGFTLSAMYPCCHSFILI
LTSRELKQATMRALQRLKCCET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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