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Report for CCDS62695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62695.1 Public Homo sapiens 19 PSG4 24 110 108 CCDS HistoryNCBI Gene:5672Re-query CCDS DB by CCDS ID:62695.1Re-query CCDS DB by GeneID:5672See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 62695.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433626.6 ENSP00000387864.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433626.6Link to Ensembl Protein Viewer:ENSP00000387864.2Re-query CCDS DB by Nucleotide ID:ENST00000433626Re-query CCDS DB by Protein ID:ENSP00000387864
Original member Current member NCBI NM_001276495.2 NP_001263424.1 Accepted alive Link to Nucleotide Sequence:NM_001276495.2Link to Protein Sequence:NP_001263424.1Re-query CCDS DB by Nucleotide ID:NM_001276495Re-query CCDS DB by Protein ID:NP_001263424Link to BLAST:NP_001263424.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263424.1 326 Q00888-3 326 100% 0 0

Chromosomal Locations for CCDS 62695.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43193372 43193388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43194340 43194594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43194995 43195273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43203886 43204251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43205473 43205536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGGGGCCCCTCTCAGCCCCTCCCTGCACACAGCGCATCACCTGGAAGGGGGTCCTGCTCACAGCATCAC
TTTTAAACTTCTGGAATCCGCCCACAACTGCCCAAGTCACGATTGAAGCCCAGCCACCCAAAGTTTCTGA
GGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTGCTGGCTACATTTGGTACAAAGGG
CAAATGACATACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAAGAATTATATATGGGCCTG
CATACAGTGGAAGAGAAAGAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACGCAGGAGGATGC
AGGATCCTACACCTTACACATCATAAAGCGACGCGATGGGACTGGAGGAGTAACTGGACATTTCACCTTC
ACCTTACACCCAAAGCTGTCCAAGCCCTACATCACAATCAACAACTTAAACCCCAGAGAGAATAAGGATG
TCTTAACCTTCACCTGTGAACCTAAGAGTAAGAACTACACCTACATTTGGTGGCTAAATGGTCAGAGCCT
CCCTGTCAGTCCCAGGGTAAAGCGACCCATTGAAAACAGGATCCTCATTCTACCCAATGTCACGAGAAAT
GAAACAGGACCTTATCAATGTGAAATACGGGACCGATATGGTGGCATCCGCAGTGACCCAGTCACCCTGA
ATGTCCTCTATGGTCCAGACCTCCCCAGCATTTACCCTTCATTCACCTATTACCGTTCAGGAGAAAACCT
CTACTTGTCCTGCTTCGCCGAGTCTAACCCACGGGCACAATATTCTTGGACAATTAATGGGAAGTTTCAG
CTATCAGGACAAAAGCTCTCTATCCCCCAAATAACTACAAAGCATAGTGGGCTCTATGCTTGCTCTGTTC
GTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATCACAGTCAAAGTCTCTGACTGGATATTACCCTG
A

Translation (326 aa):
MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQNLAGYIWYKG
QMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSYTLHIIKRRDGTGGVTGHFTF
TLHPKLSKPYITINNLNPRENKDVLTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNVTRN
ETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNPRAQYSWTINGKFQ
LSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVSDWILP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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