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Report for CCDS32993.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32993.1 Public Homo sapiens 19 HPN 24 110 108 CCDS HistoryNCBI Gene:3249Re-query CCDS DB by CCDS ID:32993.1Re-query CCDS DB by GeneID:3249See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32993.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262626.6 ENSP00000262626.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262626.6Link to Ensembl Protein Viewer:ENSP00000262626.2Re-query CCDS DB by Nucleotide ID:ENST00000262626Re-query CCDS DB by Protein ID:ENSP00000262626
Original member Current member EBI ENST00000392226.5 ENSP00000376060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392226.5Link to Ensembl Protein Viewer:ENSP00000376060.1Re-query CCDS DB by Nucleotide ID:ENST00000392226Re-query CCDS DB by Protein ID:ENSP00000376060
Original member Current member EBI ENST00000672452.2 ENSP00000500664.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000672452.2Link to Ensembl Protein Viewer:ENSP00000500664.1Re-query CCDS DB by Nucleotide ID:ENST00000672452Re-query CCDS DB by Protein ID:ENSP00000500664
Original member Current member EBI ENST00000673426.1 ENSP00000500909.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000673426.1Link to Ensembl Protein Viewer:ENSP00000500909.1Re-query CCDS DB by Nucleotide ID:ENST00000673426Re-query CCDS DB by Protein ID:ENSP00000500909
Original member Current member NCBI NM_001375441.3 NP_001362370.1 Accepted alive Link to Nucleotide Sequence:NM_001375441.3Link to Protein Sequence:NP_001362370.1Re-query CCDS DB by Nucleotide ID:NM_001375441Re-query CCDS DB by Protein ID:NP_001362370Link to BLAST:NP_001362370.1
Original member Current member NCBI NM_001384133.1 NP_001371062.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001384133.1Link to Protein Sequence:NP_001371062.1Re-query CCDS DB by Nucleotide ID:NM_001384133Re-query CCDS DB by Protein ID:NP_001371062Link to BLAST:NP_001371062.1
Original member Current member NCBI NM_002151.5 NP_002142.1 Accepted alive Link to Nucleotide Sequence:NM_002151.5Link to Protein Sequence:NP_002142.1Re-query CCDS DB by Nucleotide ID:NM_002151Re-query CCDS DB by Protein ID:NP_002142Link to BLAST:NP_002142.1
Original member Current member NCBI NM_182983.5 NP_892028.1 Accepted alive Link to Nucleotide Sequence:NM_182983.5Link to Protein Sequence:NP_892028.1Re-query CCDS DB by Nucleotide ID:NM_182983Re-query CCDS DB by Protein ID:NP_892028Link to BLAST:NP_892028.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001362370.1 417 P05981 417 100% 0 0
NP_001371062.1 417 P05981 417 100% 0 0
NP_002142.1 417 P05981 417 100% 0 0
NP_892028.1 417 P05981 417 100% 0 0

Chromosomal Locations for CCDS 32993.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35042507 35042522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35049290 35049391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35049475 35049516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35059673 35059802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35059874 35059996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35060129 35060169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35060347 35060512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35060627 35060817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35065250 35065345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35065539 35065681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35065868 35066032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35066249 35066287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGGCGCAGAAGGAGGGTGGCCGGACTGTGCCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCACTGCGG
GGACCCTGCTACTTCTGACAGCCATCGGGGCGGCATCCTGGGCCATTGTGGCTGTTCTCCTCAGGAGTGA
CCAGGAGCCGCTGTACCCAGTGCAGGTCAGCTCTGCGGACGCTCGGCTCATGGTCTTTGACAAGACGGAA
GGGACGTGGCGGCTGCTGTGCTCCTCGCGCTCCAACGCCAGGGTAGCCGGACTCAGCTGCGAGGAGATGG
GCTTCCTCAGGGCACTGACCCACTCCGAGCTGGACGTGCGAACGGCGGGCGCCAATGGCACGTCGGGCTT
CTTCTGTGTGGACGAGGGGAGGCTGCCCCACACCCAGAGGCTGCTGGAGGTCATCTCCGTGTGTGATTGC
CCCAGAGGCCGTTTCTTGGCCGCCATCTGCCAAGACTGTGGCCGCAGGAAGCTGCCCGTGGACCGCATCG
TGGGAGGCCGGGACACCAGCTTGGGCCGGTGGCCGTGGCAAGTCAGCCTTCGCTATGATGGAGCACACCT
CTGTGGGGGATCCCTGCTCTCCGGGGACTGGGTGCTGACAGCCGCCCACTGCTTCCCGGAGCGGAACCGG
GTCCTGTCCCGATGGCGAGTGTTTGCCGGTGCCGTGGCCCAGGCCTCTCCCCACGGTCTGCAGCTGGGGG
TGCAGGCTGTGGTCTACCACGGGGGCTATCTTCCCTTTCGGGACCCCAACAGCGAGGAGAACAGCAACGA
TATTGCCCTGGTCCACCTCTCCAGTCCCCTGCCCCTCACAGAATACATCCAGCCTGTGTGCCTCCCAGCT
GCCGGCCAGGCCCTGGTGGATGGCAAGATCTGTACCGTGACGGGCTGGGGCAACACGCAGTACTATGGCC
AACAGGCCGGGGTACTCCAGGAGGCTCGAGTCCCCATAATCAGCAATGATGTCTGCAATGGCGCTGACTT
CTATGGAAACCAGATCAAGCCCAAGATGTTCTGTGCTGGCTACCCCGAGGGTGGCATTGATGCCTGCCAG
GGCGACAGCGGTGGTCCCTTTGTGTGTGAGGACAGCATCTCTCGGACGCCACGTTGGCGGCTGTGTGGCA
TTGTGAGTTGGGGCACTGGCTGTGCCCTGGCCCAGAAGCCAGGCGTCTACACCAAAGTCAGTGACTTCCG
GGAGTGGATCTTCCAGGCCATAAAGACTCACTCCGAAGCCAGCGGCATGGTGACCCAGCTCTGA

Translation (417 aa):
MAQKEGGRTVPCCSRPKVAALTAGTLLLLTAIGAASWAIVAVLLRSDQEPLYPVQVSSADARLMVFDKTE
GTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDC
PRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNR
VLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPA
AGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQ
GDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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