NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32920.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32920.1 Public Homo sapiens 19 GET3 24 110 108 CCDS HistoryNCBI Gene:439Re-query CCDS DB by CCDS ID:32920.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32920.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357332.8 ENSP00000349887.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357332.8Link to Ensembl Protein Viewer:ENSP00000349887.3Re-query CCDS DB by Nucleotide ID:ENST00000357332Re-query CCDS DB by Protein ID:ENSP00000349887
Original member Current member EBI ENST00000591090.5 ENSP00000466379.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591090.5Link to Ensembl Protein Viewer:ENSP00000466379.1Re-query CCDS DB by Nucleotide ID:ENST00000591090Re-query CCDS DB by Protein ID:ENSP00000466379
Original member Current member NCBI NM_001371488.1 NP_001358417.1 Accepted alive Link to Nucleotide Sequence:NM_001371488.1Link to Protein Sequence:NP_001358417.1Re-query CCDS DB by Nucleotide ID:NM_001371488Re-query CCDS DB by Protein ID:NP_001358417Link to BLAST:NP_001358417.1
Original member Current member NCBI NM_001371489.1 NP_001358418.1 Accepted alive Link to Nucleotide Sequence:NM_001371489.1Link to Protein Sequence:NP_001358418.1Re-query CCDS DB by Nucleotide ID:NM_001371489Re-query CCDS DB by Protein ID:NP_001358418Link to BLAST:NP_001358418.1
Original member Current member NCBI NM_004317.4 NP_004308.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004317.4Link to Protein Sequence:NP_004308.2Re-query CCDS DB by Nucleotide ID:NM_004317Re-query CCDS DB by Protein ID:NP_004308Link to BLAST:NP_004308.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358417.1 348 O43681 348 100% 0 0
NP_001358418.1 348 O43681 348 100% 0 0
NP_004308.2 348 O43681 348 100% 0 0

Chromosomal Locations for CCDS 32920.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12737506 12737666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12738511 12738658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12745377 12745525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12745609 12745759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12747197 12747304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12747395 12747592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12747973 12748104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGGCGGCAGGGGTGGCCGGGTGGGGGGTTGAGGCAGAGGAGTTCGAAGATGCTCCTGATGTGGAGCCGC
TGGAGCCTACACTTAGCAACATCATCGAGCAGCGCAGCCTGAAGTGGATCTTCGTCGGGGGCAAGGGTGG
TGTGGGCAAGACCACCTGCAGCTGCAGCCTGGCAGTCCAGCTCTCCAAGGGGCGTGAGAGTGTTCTGATC
ATCTCCACAGACCCAGCACACAACATCTCAGATGCTTTTGACCAGAAGTTCTCAAAGGTGCCTACCAAGG
TCAAAGGCTATGACAACCTCTTTGCTATGGAGATTGACCCCAGCCTGGGCGTGGCGGAGCTGCCTGACGA
GTTCTTCGAGGAGGACAACATGCTGAGCATGGGCAAGAAGATGATGCAGGAGGCCATGAGCGCATTTCCC
GGCATCGATGAGGCCATGAGCTATGCCGAGGTCATGAGGCTGGTGAAGGGCATGAACTTCTCGGTGGTGG
TATTTGACACGGCACCCACGGGCCACACCCTGAGGCTGCTCAACTTCCCCACCATCGTGGAGCGGGGCCT
GGGCCGGCTTATGCAGATCAAGAACCAGATCAGCCCTTTCATCTCACAGATGTGCAACATGCTGGGCCTG
GGGGACATGAACGCAGACCAGCTGGCCTCCAAGCTGGAGGAGACGCTGCCCGTCATCCGCTCAGTCAGCG
AACAGTTCAAGGACCCTGAGCAGACAACTTTCATCTGCGTATGCATTGCTGAGTTCCTGTCCCTGTATGA
GACAGAGAGGCTGATCCAGGAGCTGGCCAAGTGCAAGATTGACACACACAATATAATTGTCAACCAGCTC
GTCTTCCCCGACCCCGAGAAGCCCTGCAAGATGTGTGAGGCCCGTCACAAGATCCAGGCCAAGTATCTGG
ACCAGATGGAGGACCTGTATGAAGACTTCCACATCGTGAAGCTGCCGCTGTTACCCCATGAGGTGCGGGG
GGCAGACAAGGTCAACACCTTCTCGGCCCTCCTCCTGGAGCCCTACAAGCCCCCCAGTGCCCAGTAG

Translation (348 aa):
MAAGVAGWGVEAEEFEDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLI
ISTDPAHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFP
GIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGL
GDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQL
VFPDPEKPCKMCEARHKIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGADKVNTFSALLLEPYKPPSAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH