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Report for CCDS34209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34209.1 Public Homo sapiens 5 MAN2A1 24 110 108 CCDS HistoryNCBI Gene:4124Re-query CCDS DB by CCDS ID:34209.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261483.5 ENSP00000261483.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261483.5Link to Ensembl Protein Viewer:ENSP00000261483.4Re-query CCDS DB by Nucleotide ID:ENST00000261483Re-query CCDS DB by Protein ID:ENSP00000261483
Original member Current member NCBI NM_002372.4 NP_002363.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002372.4Link to Protein Sequence:NP_002363.2Re-query CCDS DB by Nucleotide ID:NM_002372Re-query CCDS DB by Protein ID:NP_002363Link to BLAST:NP_002363.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002363.2 1144 Q16706 1144 100% 0 0

Chromosomal Locations for CCDS 34209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 109690418 109690552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109713520 109713774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109716120 109716264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109729342 109729513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109755329 109755456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109767535 109767708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109770355 109770541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109774788 109774965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109781396 109781598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109784744 109784926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109788934 109789048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109789460 109789527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109817273 109817438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109819669 109819887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109820220 109820342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109823723 109823837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109842328 109842461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109845865 109846006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109847657 109847790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109855140 109855334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109865036 109865146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 109866846 109866998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3435 nt):
ATGAAGTTAAGCCGCCAGTTCACCGTGTTCGGCAGTGCGATCTTCTGTGTGGTGATTTTCTCGCTCTACC
TGATGCTGGACCGGGGTCACTTAGACTACCCCAGGAACCCGCGCCGCGAGGGCTCCTTCCCTCAGGGCCA
GCTCTCAATGTTGCAAGAAAAAATAGACCATTTGGAGCGTTTGCTAGCTGAGAATAATGAGATCATCTCA
AATATTAGAGACTCAGTCATCAATTTGAGTGAGTCTGTGGAGGATGGTCCGAAAAGTTCACAAAGCAATT
TCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTCACAATTATCCCTCTCAGTTGACACTGCAGACTGTCT
GTTTGCTTCACAAAGTGGAAGTCACAATTCAGATGTGCAGATGTTGGATGTTTACAGTCTAATTTCTTTT
GACAATCCAGATGGTGGAGTTTGGAAGCAAGGATTTGACATTACTTATGAATCTAATGAATGGGACACTG
AACCCCTTCAAGTCTTTGTGGTGCCTCATTCCCATAACGACCCAGGTTGGTTGAAGACTTTCAATGACTA
CTTTAGAGACAAGACTCAGTATATTTTTAATAACATGGTCCTAAAGCTGAAAGAAGACTCACGGAGGAAG
TTTATTTGGTCTGAGATCTCTTACCTTTCAAAGTGGTGGGATATTATAGATATTCAGAAGAAGGATGCTG
TTAAAAGTTTAATAGAAAATGGTCAGCTTGAAATTGTGACAGGTGGCTGGGTTATGCCTGATGAAGCTAC
TCCACATTATTTTGCCTTAATTGATCAACTAATTGAAGGACATCAGTGGCTGGAAAATAATATAGGAGTG
AAACCTCGGTCCGGCTGGGCTATTGATCCCTTTGGACACTCACCAACAATGGCTTATCTTCTAAACCGTG
CTGGACTTTCTCACATGCTTATCCAGAGAGTTCATTATGCAGTTAAAAAACACTTTGCACTGCATAAAAC
ATTGGAGTTTTTTTGGAGACAGAATTGGGATCTGGGATCTGTCACAGATATTTTATGCCACATGATGCCC
TTCTACAGCTATGACATCCCTCACACTTGTGGACCTGATCCTAAAATATGCTGCCAGTTTGATTTTAAAC
GTCTTCCTGGAGGCAGATTTGGTTGTCCCTGGGGAGTCCCCCCAGAAACAATACATCCTGGAAATGTCCA
AAGCAGGGCTCGGATGCTACTAGATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACCAAAGTTCTCCTG
GCTCCACTAGGAGATGATTTCCGCTACTGTGAATACACGGAATGGGATTTACAGTTTAAGAATTATCAGC
AGCTTTTTGATTATATGAATTCTCAGTCCAAGTTTAAAGTTAAGATACAGTTTGGAACTTTATCAGATTT
TTTTGATGCGCTGGATAAAGCAGATGAAACTCAGAGAGACAAGGGCCAATCGATGTTCCCTGTTTTAAGT
GGAGATTTTTTCACTTATGCCGATCGAGATGATCATTACTGGAGTGGCTATTTTACATCCAGACCCTTTT
ACAAACGAATGGACAGAATCATGGAATCTCATTTAAGGGCTGCTGAAATTCTTTACTATTTCGCCCTGAG
ACAAGCTCACAAATACAAGATAAATAAATTTCTCTCATCATCACTTTACACGGCACTGACAGAAGCCAGA
AGGAATTTGGGACTGTTTCAACATCATGATGCTATCACAGGAACTGCAAAAGACTGGGTGGTTGTGGATT
ATGGTACCAGACTTTTTCATTCGTTAATGGTTTTGGAGAAGATAATTGGAAATTCTGCATTTCTTCTTAT
TTTGAAGGACAAACTCACATACGACTCTTACTCTCCTGATACCTTCCTGGAGATGGATTTGAAACAAAAA
TCACAAGATTCTCTGCCACAAAAAAATATAATAAGGCTGAGTGCGGAGCCAAGGTACCTTGTGGTCTATA
ATCCTTTAGAACAAGACCGAATCTCGTTGGTCTCAGTCTATGTGAGTTCCCCGACAGTGCAAGTGTTCTC
TGCTTCAGGAAAACCTGTGGAAGTTCAAGTCAGCGCAGTTTGGGATACAGCAAATACTATTTCAGAAACA
GCCTATGAGATCTCTTTTCGAGCACATATACCGCCATTGGGACTGAAAGTGTATAAGATTTTGGAATCAG
CAAGTTCAAATTCACATTTAGCTGATTATGTCTTGTATAAGAATAAAGTAGAAGATAGCGGAATTTTCAC
CATAAAGAATATGATAAATACTGAAGAAGGTATAACACTAGAGAACTCCTTTGTTTTACTTCGGTTTGAT
CAAACTGGACTTATGAAGCAAATGATGACTAAAGAAGATGGTAAACACCATGAAGTAAATGTGCAATTTT
CATGGTATGGAACCACAATTAAAAGAGACAAAAGTGGTGCCTACCTCTTCTTACCTGATGGTAATGCCAA
GCCTTATGTTTACACAACACCGCCCTTTGTCAGAGTGACACATGGAAGGATTTATTCGGAAGTGACTTGC
TTTTTTGACCATGTTACTCATAGAGTCCGACTATACCACATACAGGGAATAGAAGGACAGTCTGTGGAAG
TTTCCAATATTGTGGACATCCGAAAAGTATATAACCGTGAGATTGCAATGAAAATTTCTTCTGATATAAA
AAGCCAAAATAGATTTTATACTGACCTAAATGGGTACCAGATTCAACCTAGAATGACACTGAGCAAATTG
CCTCTTCAAGCAAATGTCTATCCCATGACCACAATGGCCTATATCCAGGATGCCAAACATCGTTTGACAC
TGCTCTCTGCTCAGTCATTAGGGGTTTCGAGTTTGAATAGTGGTCAGATTGAAGTTATCATGGATCGAAG
ACTCATGCAAGATGATAATCGTGGCCTTGAGCAAGGTATCCAGGATAACAAGATTACAGCTAATCTATTT
CGAATACTACTAGAAAAAAGAAGTGCTGTTAATACGGAAGAAGAAAAGAAGTCGGTCAGTTATCCTTCTC
TCCTTAGCCACATAACTTCTTCTCTCATGAATCATCCAGTCATTCCAATGGCAAATAAGTTCTCCTCACC
TACCCTTGAGCTGCAAGGTGAATTCTCTCCATTACAGTCATCTTTGCCTTGTGACATTCATCTGGTTAAT
TTGAGAACAATACAGTCAAAGGTGGGCAATGGGCACTCCAATGAGGCAGCCTTGATCCTCCACAGAAAAG
GGTTTGATTGTCGGTTCTCTAGCAAAGGCACAGGGCTGTTTTGTTCTACTACTCAGGGAAAGATATTGGT
ACAGAAACTTTTAAACAAGTTTATTGTCGAAAGTCTCACACCTTCATCACTATCCTTGATGCATTCACCT
CCCGGCACTCAGAATATAAGTGAGATCAACTTGAGTCCAATGGAAATCAGCACATTCCGAATCCAGTTGA
GGTGA

Translation (1144 aa):
MKLSRQFTVFGSAIFCVVIFSLYLMLDRGHLDYPRNPRREGSFPQGQLSMLQEKIDHLERLLAENNEIIS
NIRDSVINLSESVEDGPKSSQSNFSQGAGSHLLPSQLSLSVDTADCLFASQSGSHNSDVQMLDVYSLISF
DNPDGGVWKQGFDITYESNEWDTEPLQVFVVPHSHNDPGWLKTFNDYFRDKTQYIFNNMVLKLKEDSRRK
FIWSEISYLSKWWDIIDIQKKDAVKSLIENGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLENNIGV
KPRSGWAIDPFGHSPTMAYLLNRAGLSHMLIQRVHYAVKKHFALHKTLEFFWRQNWDLGSVTDILCHMMP
FYSYDIPHTCGPDPKICCQFDFKRLPGGRFGCPWGVPPETIHPGNVQSRARMLLDQYRKKSKLFRTKVLL
APLGDDFRYCEYTEWDLQFKNYQQLFDYMNSQSKFKVKIQFGTLSDFFDALDKADETQRDKGQSMFPVLS
GDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESHLRAAEILYYFALRQAHKYKINKFLSSSLYTALTEAR
RNLGLFQHHDAITGTAKDWVVVDYGTRLFHSLMVLEKIIGNSAFLLILKDKLTYDSYSPDTFLEMDLKQK
SQDSLPQKNIIRLSAEPRYLVVYNPLEQDRISLVSVYVSSPTVQVFSASGKPVEVQVSAVWDTANTISET
AYEISFRAHIPPLGLKVYKILESASSNSHLADYVLYKNKVEDSGIFTIKNMINTEEGITLENSFVLLRFD
QTGLMKQMMTKEDGKHHEVNVQFSWYGTTIKRDKSGAYLFLPDGNAKPYVYTTPPFVRVTHGRIYSEVTC
FFDHVTHRVRLYHIQGIEGQSVEVSNIVDIRKVYNREIAMKISSDIKSQNRFYTDLNGYQIQPRMTLSKL
PLQANVYPMTTMAYIQDAKHRLTLLSAQSLGVSSLNSGQIEVIMDRRLMQDDNRGLEQGIQDNKITANLF
RILLEKRSAVNTEEEKKSVSYPSLLSHITSSLMNHPVIPMANKFSSPTLELQGEFSPLQSSLPCDIHLVN
LRTIQSKVGNGHSNEAALILHRKGFDCRFSSKGTGLFCSTTQGKILVQKLLNKFIVESLTPSSLSLMHSP
PGTQNISEINLSPMEISTFRIQLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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