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Report for CCDS38232.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
38232.2 |
Public |
Mus musculus |
2 |
Gpat2 |
23 |
108 |
98 |
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Public Note for CCDS 38232.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript and conservation data. |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 38232.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000062211.3 |
ENSMUSP00000049619.3 |
Accepted |
alive |
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NCBI |
NM_001081089.2 |
NP_001074558.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001074558.2 |
801 |
Q14DK4-1 |
801 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 38232.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2406 nt): ATGGATACCATGTTGAAATCCAACCCCCAAACCCAGCAGAGGAGTAACCACAATGGTCAAGAGACCAGCC TTTGGTCCTCAAGCTTTGGGATGAAGATGGAGGCCATCACTCCATTCCTGGGAAAGTATCGCCCCTTTAT GGGCCGCTGCTGCCAGACCTGTACTCCTAAGAGCTGGGAGTCCCTCTTCCACAGAAGCATAATGGACCTG GGCTTCTGCAACGTGATCCTTGTGAAGGAGGAGAACACCAGGTTCCGGGGCTGGCTGGTTCGCAGGCTCT GCTATTTCCTGTGGTCCCTGGAGCAGCACATACCCACCAGTTTTGATGCCTCCCAGAAGATCATGGAAAA CACTGGGGTGCAGAACCTCCTCTCGGGGAGGGTTCCGGGAGCGGCTGGAGAAGGCCAGGCGCCTGAATTA GTGAAGAAAGAGGTACAGCGTATCCTGGGCCACATTCAGACCACACCCCGCCCCTTCTTGCTCAGGCTGT TCAGCTGGGCACTGCTGTGGTTCCTGAACCGCCTCTTCCTGAATGTACAACTTCACAAGGGACAGATGAA GATGGTTCAGAAGGCTGTGCAGGAGGGCTCTCCACTTGTCTTCCTTTCTACACACAAGTCCCTCTTGGAT GGATTCCTGCTGCCTTTTGTACTGTTCTCCCAAGGCCTCGGTGTGGTCCGTGTGGCTTTAGACTCCCGCA CATGTTCCCCTGCTCTCAGAGCTCTATTGAGGAAACTTGGGGGACTTTTCCTGCCCCCAGAGGTCAACCT CTCCTTGGACAACTCAGAGGGCATCCTTGCAAGGGCTGTGGTCCGTGCAACTGTGGAGGAGCTGCTTACT AGTGGTCAGCCTCTGCTCATCTTCCTGGAAGAGCCCCCTGGGTCCCCAGGGCCCAGGCTTTCTGCCCTGG GCCAGGCCTGGCTAGGAGTGGTAATCCAGGCGGTCCAGGCAGGCATTATCTCAGATGCCACACTGGTACC AGTTGCCATTGCCTATGACCTGGTTCCAGATGCACCATGTAACATGAACCATGATTTGGCTCCCCTGGGG CTATGGACAGGAGCCTTGGCTGTCTTTCGGAGACTGTGTAACTGCTGGGGCTGCAACCGTAGAGTCTGTG TTCGGGTGCACCTTGCCCAGCCATTTTCCCTCCAGGAATACACCATCAATGCTAGAAGTTGCTGGGATAG CAGGCAGACCCTGGAACACTTGTTGCAGCCCATTGTGCTAGGTGAATGTAGTGTTGTTCCGGACACTGAG AAGGAGCAGGAGTGGACCCCACCAACTGGCCTCCTCCTGGCCCTTAAAGAGGAGGACCAGCTCCTGGTCA GAAGACTGAGCCGGCATGTTCTGAGTGCCAGTGTGGCCAGCTCCGCAGTGATGAGCACAGCCATCATGGC CACACTGCTTTTGCTGAAGCACCAAAAGGGTGTGGTCCTGTCACAGCTCCTGGGAGAATTCTCCTGGCTG ACAGAGGAGACACTGCTCCGAGGTTTTGATGTGGGCTTCTCAGGGCAGCTGCGGTGCCTGGCCCAACATA CACTGAGCCTATTGAGGGCACATGTGGTTCTGCTGCGTGTCCACCAAGGGGACTTGGTGGTGGTACCTCG GCCTGGCCCAGGCCTCACACACCTGGCACGCTTGAGTATGGAATTGCTGCCAACCTTCCTGAGTGAGGCT GTGGGTGCCTGTGCAGTGCGGGGGTTGCTGGCAGGCAGAGTACCACCTGAGGGGCCCTGGGAGCTGCAGG GCATAGAGCTACTGAGTCAGAATGAACTGTACCGCCAGATCCTACTGCTGCTGCACCTGCTACCTCAAGA CCTACTGCTGCCCCAGCCCTGCCAGTCTTCCTACTGCTACTGTCAGGAAGTGCTAGACCGGCTCATCCAG TGTGGACTCCTAGTTGCTGAGGAGACTCCAGGCTCCCGGCCAGCCTGTGACACAGGAAGACAGCATCTGA GTGCAAAGCTGCTGTGGAAGCCGAGTGGGGACTTTACTGACAGTGAGAGTGATGACTTTGAGGAGCCAGG AGGCCGCTGCTTCAGGCTTAGCCAGCAATCCCGCTGCCCTGACTTCTTCCTCTTCCTCTGCCGCTTGCTC AGTCCCATACTCAAGGCCTTCGCACAGGCGGCCACCTTCCTCCACTTAGGGCAGCTGCCAGATTCAGAGG TGGCCTACTCAGAGAAGTTGTTCCAGTTTTTACAGGCCTGTGCCCAAGAAGAAGGGATCTTTGAGTGTGC AGACCCAAACCTTGCTATCAGTGCAGTCTGGACGTTCAAAGATCTGGGGGTACTTCAGGAGATGCCTAGC CCTACAGGACCCCAGCTCCACCTGTCCCCTACATTTGCCACCCGGGACAATCAGGACAAGCTGGAACAAT TTATCCGACAGTTCATCTGCAGTTAG
Translation (801 aa): MDTMLKSNPQTQQRSNHNGQETSLWSSSFGMKMEAITPFLGKYRPFMGRCCQTCTPKSWESLFHRSIMDL GFCNVILVKEENTRFRGWLVRRLCYFLWSLEQHIPTSFDASQKIMENTGVQNLLSGRVPGAAGEGQAPEL VKKEVQRILGHIQTTPRPFLLRLFSWALLWFLNRLFLNVQLHKGQMKMVQKAVQEGSPLVFLSTHKSLLD GFLLPFVLFSQGLGVVRVALDSRTCSPALRALLRKLGGLFLPPEVNLSLDNSEGILARAVVRATVEELLT SGQPLLIFLEEPPGSPGPRLSALGQAWLGVVIQAVQAGIISDATLVPVAIAYDLVPDAPCNMNHDLAPLG LWTGALAVFRRLCNCWGCNRRVCVRVHLAQPFSLQEYTINARSCWDSRQTLEHLLQPIVLGECSVVPDTE KEQEWTPPTGLLLALKEEDQLLVRRLSRHVLSASVASSAVMSTAIMATLLLLKHQKGVVLSQLLGEFSWL TEETLLRGFDVGFSGQLRCLAQHTLSLLRAHVVLLRVHQGDLVVVPRPGPGLTHLARLSMELLPTFLSEA VGACAVRGLLAGRVPPEGPWELQGIELLSQNELYRQILLLLHLLPQDLLLPQPCQSSYCYCQEVLDRLIQ CGLLVAEETPGSRPACDTGRQHLSAKLLWKPSGDFTDSESDDFEEPGGRCFRLSQQSRCPDFFLFLCRLL SPILKAFAQAATFLHLGQLPDSEVAYSEKLFQFLQACAQEEGIFECADPNLAISAVWTFKDLGVLQEMPS PTGPQLHLSPTFATRDNQDKLEQFIRQFICS
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