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Report for CCDS31727.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31727.1 Public Homo sapiens 12 DCP1B 24 110 108 CCDS HistoryNCBI Gene:196513Re-query CCDS DB by CCDS ID:31727.1Re-query CCDS DB by GeneID:196513See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31727.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280665.11 ENSP00000280665.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280665.11Link to Ensembl Protein Viewer:ENSP00000280665.6Re-query CCDS DB by Nucleotide ID:ENST00000280665Re-query CCDS DB by Protein ID:ENSP00000280665
Original member Current member NCBI NM_152640.5 NP_689853.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152640.5Link to Protein Sequence:NP_689853.3Re-query CCDS DB by Nucleotide ID:NM_152640Re-query CCDS DB by Protein ID:NP_689853Link to BLAST:NP_689853.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689853.3 617 Q8IZD4-1 617 100% 0 0

Chromosomal Locations for CCDS 31727.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 1946206 1946286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1949086 1949334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1952416 1953288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1955432 1955560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1965558 1965693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1967844 1967910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1993264 1993391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1997935 1997975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 2004282 2004431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1854 nt):
ATGGCAGCCGTGGCGGCAGGCGGCCTGGTGGGAAAGGGGCGCGACATCAGCCTAGCGGCCCTGCAGCGCC
ACGACCCCTATATCAACCGCATCGTGGACGTGGCCAGCCAGGTGGCTCTGTACACCTTCGGCCATCGGGC
CAACGAGTGGGAGAAAACTGATGTGGAAGGAACCTTATTTGTTTATACAAGGTCTGCTTCTCCAAAGCAT
GGATTCACCATTATGAATAGGCTGAGCATGGAAAATAGGACAGAACCTATTACTAAAGACTTGGATTTCC
AACTCCAGGACCCTTTCCTTCTCTACAGAAATGCCAGATTGTCCATCTATGGAATTTGGTTTTATGATAA
GGAAGAATGCCAAAGAATTGCAGAGCTTATGAAAAACCTAACTCAGTATGAACAGTTGAAAGCCCATCAG
GGAACTGGAGCAGGAATTTCCCCAGTGATCCTCAATTCAGGAGAGGGCAAAGAAGTAGACATTTTACGAA
TGCTCATCAAGGCCAAAGACGAATACACAAAGTGTAAAACCTGTTCTGAGCCAAAAAAGATAACCAGTTC
CTCTGCCATCTATGACAATCCAAATCTCATCAAACCAATTCCAGTGAAACCCAGTGAAAACCAGCAACAG
CGTATACCTCAGCCCAACCAGACCTTAGACCCTGAACCCCAACACTTATCCTTGACAGCTCTGTTTGGGA
AGCAGGACAAAGCTACATGTCAGGAAACTGTGGAGCCTCCGCAGACTCTCCACCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAAGAGAAGCTTCCAATTAGGCAGGGGGTTGTACGCTCCCTGTCCTATGAGGAACCCAGA
AGACACTCACCCCCCATTGAGAAGCAGCTCTGTCCAGCCATTCAGAAACTCATGGTCAGGAGCGCAGACC
TCCACCCATTGTCAGAGCTGCCTGAAAACCGGCCTTGTGAAAATGGCAGTACCCATTCTGCGGGAGAATT
TTTTACAGGACCTGTCCAGCCAGGGTCTCCTCACAACATTGGAACTTCTCGTGGTGTACAAAATGCTTCC
AGAACTCAGAACCTGTTCGAGAAACTTCAGAGTACCCCAGGGGCAGCAAACAAGTGTGACCCTAGTACAC
CAGCACCTGCCAGCTCAGCTGCCCTGAACCGCAGCAGAGCTCCCACTTCTGTCACCCCTGTGGCTCCAGG
AAAGGGTCTGGCTCAGCCACCACAGGCCTATTTCAATGGCTCCCTTCCACCTCAGACAGTAGGACATCAG
GCTCATGGAAGAGAACAGTCCACACTCCCAAGACAAACACTCCCCATCTCTGGTAGTCAGACTGGCAGCT
CTGGAGTGATCTCCCCTCAAGAGTTACTGAAGAAGCTTCAGATTGTACAGCAGGAGCAGCAGCTGCATGC
CTCTAACCGGCCAGCCTTGGCCGCTAAGTTTCCTGTGCTCGCTCAGAGCTCTGGAACAGGGAAACCCTTG
GAATCCTGGATCAACAAGACACCCAACACAGAACAGCAGACTCCTCTTTTCCAGGTCATCTCACCTCAGC
GCATCCCTGCTACAGCAGCTCCGTCTCTGCTTATGTCCCCCATGGTGTTCGCACAACCCACCTCCGTCCC
GCCAAAGGAAAGGGAGAGCGGCCTCTTGCCTGTGGGAGGCCAGGAGCCACCTGCTGCTGCCACCAGCCTC
CTCCTGCCCATACAGAGCCCGGAGCCCTCCGTGATCACCAGCAGCCCACTCACCAAGCTCCAGCTCCAGG
AGGCACTGCTGTACCTCATTCAGAATGATGACAACTTCTTAAATATAATCTATGAAGCCTATCTCTTCAG
CATGACTCAAGCAGCCATGAAAAAGACTATGTGA

Translation (617 aa):
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKH
GFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQYEQLKAHQ
GTGAGISPVILNSGEGKEVDILRMLIKAKDEYTKCKTCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQ
RIPQPNQTLDPEPQHLSLTALFGKQDKATCQETVEPPQTLHQQQQQQQQQQEKLPIRQGVVRSLSYEEPR
RHSPPIEKQLCPAIQKLMVRSADLHPLSELPENRPCENGSTHSAGEFFTGPVQPGSPHNIGTSRGVQNAS
RTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSRAPTSVTPVAPGKGLAQPPQAYFNGSLPPQTVGHQ
AHGREQSTLPRQTLPISGSQTGSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPL
ESWINKTPNTEQQTPLFQVISPQRIPATAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSL
LLPIQSPEPSVITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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