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Report for CCDS35910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35910.1 Public Mus musculus 10 Spock2 23 108 98 CCDS HistoryNCBI Gene:94214Re-query CCDS DB by CCDS ID:35910.1Re-query CCDS DB by GeneID:94214See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35910.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121820.8 ENSMUSP00000113115.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121820.8Link to Ensembl Protein Viewer:ENSMUSP00000113115.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000121820Re-query CCDS DB by Protein ID:ENSMUSP00000113115
Original member Current member NCBI NM_052994.2 NP_443720.1 Accepted alive Link to Nucleotide Sequence:NM_052994.2Link to Protein Sequence:NP_443720.1Re-query CCDS DB by Nucleotide ID:NM_052994Re-query CCDS DB by Protein ID:NP_443720Link to BLAST:NP_443720.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443720.1 423 Q9ER58 423 100% 0 0

Chromosomal Locations for CCDS 35910.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 60106468 60106656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60121232 60121240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60121478 60121523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60121684 60121798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60123810 60123924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60125710 60125824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60126154 60126270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60126834 60127052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60129681 60129743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60131084 60131221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60131336 60131481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGCGCGCTCCAGGCTCCGGGCGGCTGGCTCTGCCGCTGCTGCTCCTCGCCGTGGTCGCCTTGGCTGAAG
GCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTC
CATCTCGCAGTACAGCGGCAAGATTAAGCACTGGAACCGCTTCCGAGACGAGGTAGAAGATGATTACATC
AAGAGCTGGGAAGACAATCAGCAAGGAGATGAAGCTCTGGATACCACCAAGGACCCCTGCCAGAAGGTGA
AGTGCAGTCGCCACAAGGTGTGTGTTGCTCAAGGCTACCAGCGCGCCATGTGCATCAGCCGCAAGAAGTT
GGAGCACAGGATCAAGCAGCCTTCTCTGAAACTCCACGGAGGCAAAGACTCCGTCTGCAAGCCCTGTCAT
ATGGCCCAGCTCGCTTCAGTCTGTGGCTCCGACGGCCATACCTACAGCTCTGTGTGTAAGCTGGAGCAGC
AGGCATGCCTAAGCAGCAAGCAGCTGGCGGTGAGATGTGAGGGCCCCTGTCCCTGTCCCACGGAGCAGTC
TACTGCGTCTACCACCGACAGCAAGTCAGAGACCTGCACAGGGCAGGACCTGGCCGACCTGGGGGATAGG
CTCCGTGACTGGTTCCAGCTCCTTCGTGAGAACTCCAAGCAGAACGGCTCAGCCAACAGTGCAACTAACC
CCGCAGGGTTGGACAAGAGCCTGGGGGCCAGTTGCAAGGACTCCATCGGTTGGATGTTCTCTAAGCTGGA
CACTAGTGGAGACCTCTTCCTGGACCAGACAGAACTGGCTGCCATCAACCTGGACAAATACGAGGTCTGC
ATCCGCCCCTTCTTCAACTCCTGTGATACCTACAAAGATGGCCGCGTCTCTACTGCTGAGTGGTGCTTCT
GTTTCTGGAGGGAGAAGCCCCCCTGCCTGGCAGAGCTGGAGCGCACACAGATCCAGGAGGCAGCCAAGAA
GAAGCCAGGTGTCTTCATCCCGAGCTGTGATGAAGATGGCTACTACCGGAAGATGCAGTGTGACCAGAGC
AGAGGTGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCTGACCGGCACACGCATGCATGGGACCCCTG
ACTGTGATGACATCGTGGGTTTCTCCGGGGACTTTGGAAGCGGCGTTGGCTGGGAGGATGAGGAAGAAAA
GGAGACAGAAGAGGCAGGGGAGGAGGCCGAGGAGGAGGAGGGTGAGGCGGGTGAGGCAGATGATGGAGGC
TACATCTGGTAG

Translation (423 aa):
MRAPGSGRLALPLLLLAVVALAEGDAKGLKEGETPGNFMEDEQWLSSISQYSGKIKHWNRFRDEVEDDYI
KSWEDNQQGDEALDTTKDPCQKVKCSRHKVCVAQGYQRAMCISRKKLEHRIKQPSLKLHGGKDSVCKPCH
MAQLASVCGSDGHTYSSVCKLEQQACLSSKQLAVRCEGPCPCPTEQSTASTTDSKSETCTGQDLADLGDR
LRDWFQLLRENSKQNGSANSATNPAGLDKSLGASCKDSIGWMFSKLDTSGDLFLDQTELAAINLDKYEVC
IRPFFNSCDTYKDGRVSTAEWCFCFWREKPPCLAELERTQIQEAAKKKPGVFIPSCDEDGYYRKMQCDQS
RGDCWCVDQLGLELTGTRMHGTPDCDDIVGFSGDFGSGVGWEDEEEKETEEAGEEAEEEEGEAGEADDGG
YIW


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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