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Report for CCDS86302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86302.1 Public Homo sapiens 12 FIGNL2 24 110 108 CCDS HistoryNCBI Gene:401720Re-query CCDS DB by CCDS ID:86302.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 86302.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618634.3 ENSP00000491257.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000618634.3Link to Ensembl Protein Viewer:ENSP00000491257.1Re-query CCDS DB by Nucleotide ID:ENST00000618634Re-query CCDS DB by Protein ID:ENSP00000491257
Original member Current member NCBI NM_001013690.5 NP_001013712.4 Accepted alive Link to Nucleotide Sequence:NM_001013690.5Link to Protein Sequence:NP_001013712.4Re-query CCDS DB by Nucleotide ID:NM_001013690Re-query CCDS DB by Protein ID:NP_001013712Link to BLAST:NP_001013712.4
Original member Current member NCBI NM_001384995.1 NP_001371924.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001384995.1Link to Protein Sequence:NP_001371924.1Re-query CCDS DB by Nucleotide ID:NM_001384995Re-query CCDS DB by Protein ID:NP_001371924Link to BLAST:NP_001371924.1
Original member Current member NCBI NM_001384996.1 NP_001371925.1 Accepted alive Link to Nucleotide Sequence:NM_001384996.1Link to Protein Sequence:NP_001371925.1Re-query CCDS DB by Nucleotide ID:NM_001384996Re-query CCDS DB by Protein ID:NP_001371925Link to BLAST:NP_001371925.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013712.4 653 A6NMB9 653 100% 0 0
NP_001371924.1 653 A6NMB9 653 100% 0 0
NP_001371925.1 653 A6NMB9 653 100% 0 0

Chromosomal Locations for CCDS 86302.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 51820452 51822413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1962 nt):
ATGCACTGGACACCAGAACACGCCCAGCCCCTCAACCAGTGGCCAGAGCAGCACCTGGACGTCTCCTCCA
CCACCCCGTCGCCGGCCCACAAGTTGGAGTTGCCCCCTGGGGGTCGCCAACGCTGCCACTACGCTTGGGC
ACACGACGACATCTCAGCCCTCACTGCCTCCAACCTCCTAAAGCGCTATGCAGAGAAGTACTCTGGGGTC
TTGGATTCTCCCTACGAGCGTCCGGCCCTGGGCGGGTACAGCGACGCCTCCTTCCTCAACGGCGCCAAAG
GGGATCCCGAGCCCTGGCCAGGGCCGGAGCCACCCTACCCCTTGGCCTCACTCCACGAAGGCCTCCCAGG
AACCAAATCGGGCGGTGGCGGCGGTTCCGGGGCCCTGGGGGGCTCCCCAGTTTTAGCCGGGAACCTCCCT
GAACCCCTCTACGCCGGCAATGCGTGCGGGGGCCCATCGGCGGCGCCCGAGTACGCGGCCGGCTACGGCG
GGGGGTACCTGGCGCCGGGTTACTGCGCGCAGACGGGCGCCGCGCTGCCCCCGCCGCCCCCGGCCGCGCT
CCTGCAGCCCCCACCGCCTCCGGGGTACGGGCCCTCAGCGCCGCTGTACAACTATCCCGCAGGGGGCTAC
GCAGCGCAGCCCGGCTATGGCGCGCTCCCGCCGCCCCCAGGCCCACCCCCGGCCCCCTACCTGACCCCGG
GCCTGCCCGCGCCCACGCCCCTGCCCGCGCCGGCACCGCCCACCGCCTATGGCTTCCCCACGGCCGCGCC
GGGTGCCGAATCCGGGCTGTCGCTGAAGCGCAAGGCCGCCGACGAGGGGCCCGAGGGCCGCTACCGCAAG
TACGCGTACGAGCCCGCCAAGGCCCCCGTGGCTGACGGAGCCTCCTACCCCGCCGCGGACAACGGCGAAT
GTCGGGGCAACGGGTTCCGGGCCAAGCCGCCAGGAGCCGCGGAGGAGGCGTCGGGCAAGTACGGTGGCGG
CGTCCCCCTCAAGGTCCTGGGCTCCCCCGTCTACGGCCCGCAACTGGAGCCCTTTGAAAAGTTCCCGGAG
CGGGCCCCGGCTCCTCGTGGGGGGTTCGCCGTGCCGTCGGGGGAGACTCCCAAAGGCGTGGACCCTGGGG
CCCTGGAGCTGGTGACGAGCAAGATGGTGGACTGCGGGCCCCCGGTGCAGTGGGCGGATGTGGCGGGCCA
GGGCGCGCTCAAGGCGGCGCTGGAGGAGGAGCTGGTGTGGCCCCTGCTCAGGCCGCCCGCCTACCCGGGC
AGCCTGCGCCCGCCGCGGACCGTCCTGCTCTTTGGGCCGCGGGGCGCGGGCAAAGCGCTGCTGGGCCGCT
GCCTCGCCACGCAGCTGGGCGCCACGCTGTTGCGCCTGCGCGGCGCGACCCTGGCTGCGCCCGGCGCCGC
CGAGGGCGCGCGCCTCCTCCAGGCCGCCTTCGCGGCCGCGCGCTGCCGCCCACCCTCCGTACTCCTCATC
AGCGAGCTAGAGGCGCTGCTCCCCGCCCGGGACGACGGCGCGGCGGCAGGGGGCGCGCTGCAGGTGCCGC
TCCTGGCCTGCCTGGACGGGGGCTGCGGCGCGGGGGCTGACGGCGTGCTGGTTGTGGGCACCACCTCGCG
GCCCGCGGCTCTGGACGAGGCGACCCGCCGGCGCTTCTCTCTCCGCTTCTACGTGGCGCTGCCCGACAGC
CCGGCCCGCGGGCAGATCCTGCAGCGGGCGCTGGCCCAGCAGGGCTGCGCGCTCAGTGAGCGGGAACTGG
CGGCGCTGGTGCAGGGCACGCAGGGCTTCTCTGGGGGCGAGCTGGGGCAGCTGTGCCAGCAGGCGGCGGC
CGGGGCGGGCCTCCCGGGGCTGCAGCGCCCCCTCTCCTACAAGGACCTGGAGGCGGCGCTGGCCAAGGTG
GGCCCTAGGGCCTCTGCCAAGGAACTGGACTCGTTCGTGGAGTGGGACAAAATGTACGGCTCCGGACACT
GA

Translation (653 aa):
MHWTPEHAQPLNQWPEQHLDVSSTTPSPAHKLELPPGGRQRCHYAWAHDDISALTASNLLKRYAEKYSGV
LDSPYERPALGGYSDASFLNGAKGDPEPWPGPEPPYPLASLHEGLPGTKSGGGGGSGALGGSPVLAGNLP
EPLYAGNACGGPSAAPEYAAGYGGGYLAPGYCAQTGAALPPPPPAALLQPPPPPGYGPSAPLYNYPAGGY
AAQPGYGALPPPPGPPPAPYLTPGLPAPTPLPAPAPPTAYGFPTAAPGAESGLSLKRKAADEGPEGRYRK
YAYEPAKAPVADGASYPAADNGECRGNGFRAKPPGAAEEASGKYGGGVPLKVLGSPVYGPQLEPFEKFPE
RAPAPRGGFAVPSGETPKGVDPGALELVTSKMVDCGPPVQWADVAGQGALKAALEEELVWPLLRPPAYPG
SLRPPRTVLLFGPRGAGKALLGRCLATQLGATLLRLRGATLAAPGAAEGARLLQAAFAAARCRPPSVLLI
SELEALLPARDDGAAAGGALQVPLLACLDGGCGAGADGVLVVGTTSRPAALDEATRRRFSLRFYVALPDS
PARGQILQRALAQQGCALSERELAALVQGTQGFSGGELGQLCQQAAAGAGLPGLQRPLSYKDLEAALAKV
GPRASAKELDSFVEWDKMYGSGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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