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Report for CCDS46548.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46548.1 Public Homo sapiens 2 ASB18 24 110 108 CCDS HistoryNCBI Gene:401036Re-query CCDS DB by CCDS ID:46548.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46548.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409749.8 ENSP00000386532.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409749.8Link to Ensembl Protein Viewer:ENSP00000386532.3Re-query CCDS DB by Nucleotide ID:ENST00000409749Re-query CCDS DB by Protein ID:ENSP00000386532
Original member Current member NCBI NM_212556.4 NP_997721.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_212556.4Link to Protein Sequence:NP_997721.2Re-query CCDS DB by Nucleotide ID:NM_212556Re-query CCDS DB by Protein ID:NP_997721Link to BLAST:NP_997721.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997721.2 466 Q6ZVZ8-1 466 100% 0 0

Chromosomal Locations for CCDS 46548.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 236194872 236195057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 236196272 236196385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 236214362 236214866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 236237689 236237956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 236241280 236241402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 236264141 236264345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGTCCAACTCGGATTACCTTCCCGACTACCCACTCAACTCAGATTTAGTGAAGAGATTAAAGTCTGCCC
TGGATGCCAAAGATGAGGAGAGAGTGAGGGATTTAATCTGCACTGAAATCACGCCTGTGGACGCTGTGAT
AGAACTGGCCAATGACGACTGGATGAAAGACCCCTCGGCTCAGCTGCCCACCGGCATGCTGCTAGGGGAC
CTCGACCATCTGAAGCCCCTCATGGACCAGTTCTTCCAGGATGCCAACGTGGTGTTTGAGATCAATAAGG
ATGAGATGGAATGGCAGGTGAAATCTCCAGCCACGTTTGGACTATCAGGCCTCTGGACCCTGGAGTACAA
GCGTGAGCTCACCACGCCCCTGTGCATCGCCGCGGCCCACGGCCACACCGCCTGCGTGCGACACCTGCTC
GGCCGCGGCGCAGACCCAGACGCCAGCCCCGGCGGCCGCGGCGCCCTGCACGAGGCCTGCCTCGGGGGCC
ACACCGCCTGCGTCCGCCTGCTGCTGCAGCACCGCGCCGACCCCGACCTGCTCAGCGCCGAGGGCCTGGC
GCCTCTGCACCTCTGCCGCACGGCCGCCTCGCTCGGGTGCGCGCAGGCGCTGCTGGAGCACGGGGCCTCG
GTGCAGCGCGTGGGCGGCACGGGCCGGGACACGCCGCTGCACGTGGCGGCGCAGCGCGGCCTGGACGAGC
ACGCGCGCCTGTACCTGGGCCGCGGGGCGCACGTGGACGCGAGGAACGGCCGCGGAGAGACGGCTCTGAG
CGCGGCCTGCGGTGCGGCGCGGAGGCCCGACGAGCACGGGCGCTGCCTGCGCCTGTGCGCGCTGCTGCTG
CGGCGCGGGGCGGAGGCGGACGCGCGCGACGAGGACGAGCGCAGCCCGCTGCACAAAGCCTGCGGCCACG
CGAGCCACAGCCTGGCGCGCCTCCTACTGCGGCACGGCGCCGACGCGGGCGCGCTCGACTATGGCGGGGC
CTCGCCGCTGGGCCGCGTGCTCCAGACCGCATCCTGCGCTCTCCAGGCCTCACCGCAGCGCACGGTGCAG
GCGCTGCTCAACCACGGCTCTCCCACCGTGTGGCCCGACGCCTTCCCCAAGGTGCTGAAGACCTGTGCAT
CTGTCCCCGCAGTCATCGAGGTGCTTTTCAACTCCTACCCTCAGCTCTGCTTGTCAGAGTCCTGGAAGGA
AGTGATTCCTGAGGAAGTATTCCAGATGCACAAGCCGTTCTACCAGTCCCTCTTTGCCTTGGCCCTCACC
CCACGCTGCCTGCAGCATCTTTGCCGCTGTGCTCTTCGCAGACTGTTTGGCAAAAGGTGCTTTGACCTCA
TCCCCCTGTTACCCTTGCCAAAGCCCCTGCAGAATTACCTACTTTTGGAGCCACAGGGTGTTTTGCACTG
A

Translation (466 aa):
MSNSDYLPDYPLNSDLVKRLKSALDAKDEERVRDLICTEITPVDAVIELANDDWMKDPSAQLPTGMLLGD
LDHLKPLMDQFFQDANVVFEINKDEMEWQVKSPATFGLSGLWTLEYKRELTTPLCIAAAHGHTACVRHLL
GRGADPDASPGGRGALHEACLGGHTACVRLLLQHRADPDLLSAEGLAPLHLCRTAASLGCAQALLEHGAS
VQRVGGTGRDTPLHVAAQRGLDEHARLYLGRGAHVDARNGRGETALSAACGAARRPDEHGRCLRLCALLL
RRGAEADARDEDERSPLHKACGHASHSLARLLLRHGADAGALDYGGASPLGRVLQTASCALQASPQRTVQ
ALLNHGSPTVWPDAFPKVLKTCASVPAVIEVLFNSYPQLCLSESWKEVIPEEVFQMHKPFYQSLFALALT
PRCLQHLCRCALRRLFGKRCFDLIPLLPLPKPLQNYLLLEPQGVLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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