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Report for CCDS32865.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32865.2 Public Homo sapiens 19 MEX3D 24 110 108 CCDS HistoryNCBI Gene:399664Re-query CCDS DB by CCDS ID:32865.2See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32865.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402693.5 ENSP00000384398.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402693.5Link to Ensembl Protein Viewer:ENSP00000384398.3Re-query CCDS DB by Nucleotide ID:ENST00000402693Re-query CCDS DB by Protein ID:ENSP00000384398
Original member Current member NCBI NM_203304.4 NP_976049.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203304.4Link to Protein Sequence:NP_976049.3Re-query CCDS DB by Nucleotide ID:NM_203304Re-query CCDS DB by Protein ID:NP_976049Link to BLAST:NP_976049.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_976049.3 651 Q86XN8-1 651 100% 0 0

Chromosomal Locations for CCDS 32865.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1555563 1556923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1567464 1568058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1956 nt):
ATGCCCAGCTCGCTCGGCCAGCCCGACGGCGGCGGGGGCGGGGGCGGCGGCGGCGGCGGCGTGGGGGCGG
CGGGGGAGGACCCCGGACCCGGACCTGCGCCCCCGCCCGAGGGCGCCCAGGAGGCCGCGCCCGCGCCCCG
GCCGCCGCCCGAACCCGACGACGCGGCCGCCGCGCTCCGCCTGGCGCTGGACCAGCTGTCGGCGCTCGGG
CTGGGGGGCGCTGGCGACACGGACGAGGAGGGGGCGGCCGGGGACGGCGCAGCGGCGGCGGGGGGCGCGG
ACGGCGGGGCGGCTCCGGAGCCTGTGCCCCCCGACGGACCTGAGGCCGGCGCGCCCCCGACCCTGGCCCC
CGCCGTGGCCCCCGGGTCGCTGCCGCTGCTGGACCCCAACGCGAGTCCCCCGCCGCCGCCGCCGCCCCGG
CCGTCGCCCCCCGACGTGTTCGCGGGCTTCGCGCCCCACCCCGCGGCCCTGGGGCCCCCGACGCTGCTGG
CCGACCAGATGAGCGTGATCGGCAGCCGCAAGAAAAGCGTCAACATGACCGAGTGCGTCCCGGTGCCCAG
CTCCGAGCACGTCGCCGAGATCGTGGGTCGCCAGGGCTGCAAGATCAAGGCCCTGCGGGCCAAGACAAAC
ACCTACATCAAGACCCCAGTGCGGGGCGAGGAGCCGGTCTTCATCGTGACCGGCCGGAAGGAGGACGTGG
AGATGGCCAAGCGTGAGATCCTGTCGGCGGCCGAACACTTCTCCATCATCCGCGCCACGCGCAGCAAGGC
CGGGGGTCTGCCCGGCGCCGCCCAGGGCCCGCCCAACCTTCCCGGACAGACCACCATCCAGGTGCGCGTG
CCCTACCGGGTGGTGGGGCTGGTGGTGGGGCCCAAGGGCGCCACCATCAAGCGCATCCAGCAGCGGACGC
ACACCTACATCGTGACGCCCGGGCGCGACAAGGAGCCGGTGTTCGCGGTCACTGGGATGCCCGAGAACGT
GGACCGCGCGCGCGAGGAGATCGAGGCGCACATCACGCTGCGCACTGGCGCCTTCACCGACGCGGGCCCC
GACAGCGACTTCCACGCCAACGGCACCGACGTCTGCCTGGACCTGCTCGGGGCGGCCGCCAGCCTCTGGG
CCAAGACCCCCAACCAGGGACGACGGCCCCCCACGGCCACGGCCGGCCTCCGCGGGGACACGGCCCTGGG
CGCCCCCAGCGCCCCCGAGGCCTTCTACGCGGGCAGCCGCGGCGGCCCCTCCGTGCCGGACCCAGGCCCC
GCCAGCCCCTACAGCGGCTCCGGCAACGGGGGCTTCGCCTTCGGCGCGGAGGGTCCCGGTGCCCCGGTGG
GGACGGCCGCCCCCGACGACTGCGACTTCGGCTTCGACTTCGACTTCCTGGCGCTGGACCTGACCGTGCC
CGCCGCGGCCACCATCTGGGCGCCTTTTGAGCGCGCCGCCCCCTTGCCCGCCTTCAGCGGCTGCTCCACG
GTCAACGGAGCCCCGGGACCTCCCGCCGCCGGCGCCCGGCGCAGCAGTGGGGCCGGGACCCCCCGCCACT
CGCCCACGCTGCCCGAGCCCGGCGGCCTCCGCCTGGAGCTCCCGCTGTCTCGCCGTGGCGCCCCGGACCC
GGTGGGCGCGCTGTCCTGGCGACCCCCGCAGGGCCCCGTATCCTTCCCAGGCGGCGCCGCCTTCTCCACG
GCCACCTCGCTGCCCAGCAGCCCCGCGGCCGCCGCCTGCGCCCCCCTGGACTCCGGCGCCTCCGAGAACA
GCCGCAAGCCCCCTTCGGCGTCCTCGGCCCCGGCCCTGGCGCGAGAGTGCGTGGTGTGCGCCGAGGGCGA
GGTGATGGCTGCGCTGGTCCCCTGCGGCCACAACCTCTTCTGCATGGACTGCGCCGTCCGCATCTGCGGC
AAGAGCGAGCCCGAGTGTCCCGCCTGCCGCACGCCGGCCACCCAGGCCATTCATATCTTTTCCTAG

Translation (651 aa):
MPSSLGQPDGGGGGGGGGGGVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLALDQLSALG
LGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAPGSLPLLDPNASPPPPPPPR
PSPPDVFAGFAPHPAALGPPTLLADQMSVIGSRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTN
TYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSIIRATRSKAGGLPGAAQGPPNLPGQTTIQVRV
PYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDAGP
DSDFHANGTDVCLDLLGAAASLWAKTPNQGRRPPTATAGLRGDTALGAPSAPEAFYAGSRGGPSVPDPGP
ASPYSGSGNGGFAFGAEGPGAPVGTAAPDDCDFGFDFDFLALDLTVPAAATIWAPFERAAPLPAFSGCST
VNGAPGPPAAGARRSSGAGTPRHSPTLPEPGGLRLELPLSRRGAPDPVGALSWRPPQGPVSFPGGAAFST
ATSLPSSPAAAACAPLDSGASENSRKPPSASSAPALARECVVCAEGEVMAALVPCGHNLFCMDCAVRICG
KSEPECPACRTPATQAIHIFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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