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Report for CCDS58035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58035.1 Public Homo sapiens 1 ENTREP3 24 110 108 CCDS HistoryNCBI Gene:10712Re-query CCDS DB by CCDS ID:58035.1Re-query CCDS DB by GeneID:10712See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368368.7 ENSP00000357352.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368368.7Link to Ensembl Protein Viewer:ENSP00000357352.3Re-query CCDS DB by Nucleotide ID:ENST00000368368Re-query CCDS DB by Protein ID:ENSP00000357352
Original member Current member NCBI NM_001267608.2 NP_001254537.1 Accepted alive Link to Nucleotide Sequence:NM_001267608.2Link to Protein Sequence:NP_001254537.1Re-query CCDS DB by Nucleotide ID:NM_001267608Re-query CCDS DB by Protein ID:NP_001254537Link to BLAST:NP_001254537.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001254537.1 650 P81408-3 650 100% 0 0

Chromosomal Locations for CCDS 58035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 155247782 155247955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155248050 155248303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155248405 155248473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155250276 155250821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155251095 155251164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155251502 155251601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155251733 155251908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155253625 155253732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155253859 155253978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155254084 155254194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155254653 155254877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1953 nt):
ATGATGCCCTCGCCTAGTGACTCCAGCCGCTCGCTGACCAGCCGGCCCAGCACCAGGGGCCTTACCCACC
TCCGCCTCCACCGACCCTGGCTGCAGGCCCTGCTTACGCTGGGGCTGGTCCAAGTGCTCCTGGGCATCCT
GGTGGTCACCTTCAGCATGGTGGCCTCTTCCGTCACCACCACCGAGAGCATCAAGAGGTCCTGCCCGTCT
TGGGCTGGGTTCTCGATCTCCTTCTTCTCCTTGCTTTCGGTGCTCTGTGTCATGCTTAGCATGGCTGGCT
CTGTTCTCTCCTGTAAGAATGCTCAACTGGCCCGAGACTTCCAACAGTGCTCTCTGGAAGGAAAGGTCTG
TGTGTGCTGTCCCTCTGTTCCCCTCCTCCGGCCCTGTCCAGAGTCGGGGCAGGAACTGAAAGTTGCCCCT
AACTCCACCTGTGATGAAGCCCGAGGGGCCCTCAAGAACCTGCTCTTCAGCGTCTGTGGGCTCACCATTT
GTGCCGCTATAATCTGTACACTCTCTGCTATTGTCTGCTGCATCCAAATCTTCTCCCTGGACCTCGTGCA
TACGCAGCTGGCCCCTGAGCGGTCAGTCTCAGGCCCACTGGGACCTCTGGGCTGCACGTCCCCGCCCCCA
GCCCCTCTCCTACACACCATGCTGGACCTGGAGGAATTTGTCCCGCCTGTGCCCCCACCGCCCTACTATC
CCCCAGAGTATACCTGCAGCTCAGAAACAGATGCACAGAGCATCACGTACAATGGCTCCATGGACAGCCC
AGTGCCCTTGTACCCTACCGATTGCCCCCCTTCTTATGAGGCAGTCATGGGACTACGAGGAGACAGCCAG
GCCACTCTCTTTGACCCTCAGCTTCACGATGGCTCGTGCATCTGTGAACGAGTGGCCTCCATTGTAGACG
TGTCCATGGACAGCGGGTCTCTGGTGCTGTCAGCCATTGGTGACCTCCCTGGGGGCTCTAGCCCGTCGGA
GGACTCGTGCCTGCTGGAGCTGCAGGGCTCCGTGCGCTCCGTGGACTACGTTCTCTTTCGCTCCATCCAG
CGCAGCCGTGCCGGCTACTGCCTCAGCCTGGACTGTGGCCTGCGGGGCCCCTTCGAGGAAAGCCCCCTGC
CACGGCGCCCCCCACGGGCTGCCCGCTCCTATTCCTGCTCTGCCCCTGAAGCTCCACCCCCACTGGGTGC
CCCCACAGCTGCCCGCAGCTGCCACCGGTTGGAGGGCTGGCCGCCCTGGGTGGGACCCTGCTTCCCCGAG
CTGAGGCGGCGGGTCCCCCGGGGAGGGGGCCGCCCAGCCGCAGCCCCGCCCACCCGAGCCCCGACTCGTC
GCTTCAGCGATAGCTCAGGTTCCCTCACCCCACCGGGGCACCGGCCTCCTCATCCGGCATCCCCACCACC
GCTGCTGCTGCCACGGTCCCACAGCGACCCAGGCATCACGACCTCCAGTGACACTGCTGACTTCAGGGAC
CTTTATACCAAAGTGCTTGAGGAAGAAGCTGCTTCTGTTTCCTCTGCAGATACAGGGCTCTGCTCTGAAG
CCTGCCTCTTCCGCCTAGCCCGCTGCCCTTCCCCCAAGTTGCTACGTGCCCGGTCAGCCGAGAAACGGCG
CCCTGTGCCCACCTTCCAAAAAGTTCCCCTGCCCTCGGGCCCTGCACCTGCCCACTCCCTGGGGGACCTA
AAGGGCAGCTGGCCAGGTCGGGGCCTGGTCACTCGTTTCCTCCAGATATCCAGGAAAGCCCCAGACCCCA
GTGGGACTGGAGCTCATGGACATAAGCAGGTGCCCCGGAGCCTGTGGGGCCGGCCTGGCCGAGAGAGCCT
CCACCTTCGCAGCTGCGGAGATCTGAGCTCTAGCTCTTCCCTGCGGCGTCTCCTGTCTGGCCGCAGGCTG
GAGCGTGGTACCCGCCCCCACAGCCTCAGCCTCAACGGGGGCAGCCGGGAGACTGGGCTCTGA

Translation (650 aa):
MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTTTESIKRSCPS
WAGFSISFFSLLSVLCVMLSMAGSVLSCKNAQLARDFQQCSLEGKVCVCCPSVPLLRPCPESGQELKVAP
NSTCDEARGALKNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTQLAPERSVSGPLGPLGCTSPPP
APLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQ
ATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQ
RSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPE
LRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRD
LYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDL
KGSWPGRGLVTRFLQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRL
ERGTRPHSLSLNGGSRETGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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