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Report for CCDS30772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30772.1 Public Homo sapiens 1 C1orf146 24 110 108 CCDS HistoryNCBI Gene:388649Re-query CCDS DB by CCDS ID:30772.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370375.8 ENSP00000359401.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370375.8Link to Ensembl Protein Viewer:ENSP00000359401.3Re-query CCDS DB by Nucleotide ID:ENST00000370375Re-query CCDS DB by Protein ID:ENSP00000359401
Original member Current member NCBI NM_001012425.2 NP_001012425.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012425.2Link to Protein Sequence:NP_001012425.1Re-query CCDS DB by Nucleotide ID:NM_001012425Re-query CCDS DB by Protein ID:NP_001012425Link to BLAST:NP_001012425.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012425.1 180 Q5VVC0 180 100% 0 0

Chromosomal Locations for CCDS 30772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92231421 92231486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92242212 92242305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92244217 92244385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92244779 92244857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92245540 92245674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGGCTGAAAGTGGAAAAGAAAAAATAAAATGGACAACCACCATTATTATTAGCTCATCTCTTAAGAGTT
ATGAAGTTGCAACTGCCCTAGAAAATCGAAGCCACAAAGTTCGATATTCAGATTCAGTGGAAAATGGATC
AATTATATTTTCTCTTTCTGGAGTTGCATTTTTATTAATGGATACTAAGGAATGTCTTCTGTCAACTGAA
GAAATATTTCTAGCCAAAATTGAGAAATTTATTAACATTCACCAAAATAGTTTTTTGGTTTTGTCTGCTG
CCCTCCATGGGCCTGAAGAATGGAAACTGATGTTCAGGATTCAGCAGAGATTCCTGGGTTGTAACTTACG
AATACTTCCAGTACACAACACAGTAAATGCTATTAATCTTATGTGCACTATAGCAAAGACTACCTCCAAA
CCATACATAGATAGCATTTGCTACAGAATGATAACAGCTAAAGCTTACATCATTGAGCAAAGTCCTGTTT
GGAAAACACTTCAGAAGATAAAACTGAATAGTGATTCAGTTAACCCAAATTAG

Translation (180 aa):
MAESGKEKIKWTTTIIISSSLKSYEVATALENRSHKVRYSDSVENGSIIFSLSGVAFLLMDTKECLLSTE
EIFLAKIEKFINIHQNSFLVLSAALHGPEEWKLMFRIQQRFLGCNLRILPVHNTVNAINLMCTIAKTTSK
PYIDSICYRMITAKAYIIEQSPVWKTLQKIKLNSDSVNPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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