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Report for CCDS44983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44983.1 Public Homo sapiens 12 CFAP73 24 110 108 CCDS HistoryNCBI Gene:387885Re-query CCDS DB by CCDS ID:44983.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335621.11 ENSP00000333915.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335621.11Link to Ensembl Protein Viewer:ENSP00000333915.6Re-query CCDS DB by Nucleotide ID:ENST00000335621Re-query CCDS DB by Protein ID:ENSP00000333915
Original member Current member NCBI NM_001144872.3 NP_001138344.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144872.3Link to Protein Sequence:NP_001138344.1Re-query CCDS DB by Nucleotide ID:NM_001144872Re-query CCDS DB by Protein ID:NP_001138344Link to BLAST:NP_001138344.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138344.1 308 A6NFT4 308 100% 0 0

Chromosomal Locations for CCDS 44983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 113149858 113149913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113151918 113152023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113152783 113152887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113153208 113153408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113154414 113154635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113155260 113155418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113157602 113157679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGCGGTGCCCTGGGAGGAATATTTCCGACTGGCTTTGCAAGAGAAACTGTCTACAAAGCTGCCAGAGC
AGGCTGAGGATCATGTCCCACCAGTACTGCGTCTCCTGGAGAAGAGGCAAGAGCTGGTAGATGCAGACCA
GGCCCTGCAGGCCCAGAAGGAGGTGTTCCGCACCAAGACGGCAGCCCTGAAACAGCGTTGGGAACAGCTG
GAACAAAAGGAGCGGGAGCTAAAGGGATCGTTCATCCGCTTTGACAAGTTTTTGCAGGACTCCGAGGCCC
GGCGCAATCGCGCGCTGCGGAGGGCGGCGGAGGAGAGGCACCAGGCGGGCCGTCGGGAGGTGGAGGCGCT
GCGTCTGTGGACCCAGCTCCAGGAGCTACGGCGGGAACACGCGCGGCTGCAGCGCCGGCTTAAGCGCCTG
GAGCCCTGCGCGCGCCTGCTGGAGCAAGCGCTGGAGCTGCTGCCCGGGTTCCAAGAGGTTCCGGAGCTGG
TGGCGCGCTTCGACGGCCTGGCCGAGACGCAGGCGGCGCTGAGGCTCAGGGAGCGCGAGCAGCTCGCGGA
GCTGGAGGCGGCGCGAGCGCGGCTGCAGCAGCTGCGGGACGCCTGGCCGGACGAGGTGCTCGCACAGGGC
CAGCGGCGGGCACAGCTGCAGGAGCGCCTGGAGGCTGCCAGGGAGCGTACGCTGCAGTGGGAATCCAAGT
GGATTCAGATTCAGAACACAGCAGCGGAGAAGACTCTGCTCCTGGGACGCAGCAGGATGGCTGTGCTCAA
CCTGTTCCAGCTAGTGTGCCAGCATCAGGGGCAGCCTCCCACCCTGGACATCGAGGACACGGAGGGACAG
CTAGAGCACGTGAAGCTGTTCATGCAGGACCTCTCTGCCATGCTGGCCGGCCTGGGTCAGGCTGAGCCTG
CAGCCCCTGCCTCCTAG

Translation (308 aa):
MAVPWEEYFRLALQEKLSTKLPEQAEDHVPPVLRLLEKRQELVDADQALQAQKEVFRTKTAALKQRWEQL
EQKERELKGSFIRFDKFLQDSEARRNRALRRAAEERHQAGRREVEALRLWTQLQELRREHARLQRRLKRL
EPCARLLEQALELLPGFQEVPELVARFDGLAETQAALRLREREQLAELEAARARLQQLRDAWPDEVLAQG
QRRAQLQERLEAARERTLQWESKWIQIQNTAAEKTLLLGRSRMAVLNLFQLVCQHQGQPPTLDIEDTEGQ
LEHVKLFMQDLSAMLAGLGQAEPAAPAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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