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Report for CCDS34575.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34575.1 Public Homo sapiens 6 C6orf120 24 110 108 CCDS HistoryNCBI Gene:387263Re-query CCDS DB by CCDS ID:34575.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34575.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332290.4 ENSP00000346931.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332290.4Link to Ensembl Protein Viewer:ENSP00000346931.1Re-query CCDS DB by Nucleotide ID:ENST00000332290Re-query CCDS DB by Protein ID:ENSP00000346931
Original member Current member NCBI NM_001029863.3 NP_001025034.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001029863.3Link to Protein Sequence:NP_001025034.1Re-query CCDS DB by Nucleotide ID:NM_001029863Re-query CCDS DB by Protein ID:NP_001025034Link to BLAST:NP_001025034.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025034.1 191 Q7Z4R8 191 100% 0 0

Chromosomal Locations for CCDS 34575.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 169702460 169703035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGGCCGCTCCCCGCGGGAGGGCCGCGCCCTGGACGACGGCCCTGCTGCTGCTCCTAGCCTCGCAGGTCC
TGTCTCCGGGAAGCTGCGCGGACGAGGAGGAGGTCCCCGAGGAGTGGGTGCTCCTGCACGTCGTCCAGGG
CCAGATAGGCGCCGGGAACTACAGCTACCTGCGGCTGAACCACGAGGGCAAGATAGTCCTCAGGATGCGC
AGCCTCAAGGGAGATGCGGATCTGTACGTCTCCGCCAGCAGCCTGCACCCCAGCTTCGACGACTACGAGC
TGCAATCGGCCACCTGCGGCCCGGACGCCGTGTCCATCCCCGCGCACTTCCGGCGCCCAGTGGGCATCGG
CGTCTATGGACACCCCTCCCACCTGGAGAGCGAGTTCGAGATGAAGGTGTACTACGACGGCACGGTCGAG
CAGCACCCGTTCGGCGAGGCCGCCTACCCCGCCGACGGCGCAGATGCCGGCCAGAAGCACGCTGGTGCCC
CGGAAGACGCCTCGCAAGAGGAGGAATCTGTTCTCTGGACGATATTAATTAGCATTTTGAAACTGGTACT
TGAAATTCTCTTTTGA

Translation (191 aa):
MAAPRGRAAPWTTALLLLLASQVLSPGSCADEEEVPEEWVLLHVVQGQIGAGNYSYLRLNHEGKIVLRMR
SLKGDADLYVSASSLHPSFDDYELQSATCGPDAVSIPAHFRRPVGIGVYGHPSHLESEFEMKVYYDGTVE
QHPFGEAAYPADGADAGQKHAGAPEDASQEEESVLWTILISILKLVLEILF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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