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Report for CCDS40715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40715.1 Public Mus musculus 9 Ripply2 23 108 98 CCDS HistoryNCBI Gene:382089Re-query CCDS DB by CCDS ID:40715.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40715.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058846.10 ENSMUSP00000055369.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058846.10Link to Ensembl Protein Viewer:ENSMUSP00000055369.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000058846Re-query CCDS DB by Protein ID:ENSMUSP00000055369
Original member NCBI NM_001037907.1 NP_001032996.1 Updated not alive Link to Nucleotide Sequence:NM_001037907.1Link to Protein Sequence:NP_001032996.1Re-query CCDS DB by Nucleotide ID:NM_001037907Re-query CCDS DB by Protein ID:NP_001032996
Current member NCBI NM_001037907.2 NP_001032996.1 Accepted alive Link to Nucleotide Sequence:NM_001037907.2Link to Protein Sequence:NP_001032996.1Re-query CCDS DB by Nucleotide ID:NM_001037907Re-query CCDS DB by Protein ID:NP_001032996Link to BLAST:NP_001032996.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032996.1 128 Q2WG76 128 100% 0 0

Chromosomal Locations for CCDS 40715.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 87015545 87015630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 87015868 87015946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 87016270 87016334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 87019653 87019809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGGATACCACCGAGAGCGCCGAGAGCGCGCACAACCCAGCACGTCCGCCCTCGCGCAGCCGCTGCCCGC
CGTCCGCGCAGCCCGGGTCCGAGGGCTTCTGGAGACCGTGGGTTCGAACTCCTGGAGAGAAAGAGAAGCG
GACGGGGCCCCGTGCTGCAGAGGCGTTGCCCAGTGGCCCAGGAATGGCAGAAGCTTCCGGGAAGCTTTTG
CAATACCAACACCCTGTCAGGCTATTCTGGCCCAAGTCCAAGTGTTACGACTACTTATATCAAGAAGCAG
AAACTCTTCTGAAAAATTTCCCAATTCAAGCTACAATTTCGTTTTATGAAGATTCTGATAGTGAAGATGA
AATAGAGGGGCTGGCCTGTGAAAATCAATCTAATTAG

Translation (128 aa):
MDTTESAESAHNPARPPSRSRCPPSAQPGSEGFWRPWVRTPGEKEKRTGPRAAEALPSGPGMAEASGKLL
QYQHPVRLFWPKSKCYDYLYQEAETLLKNFPIQATISFYEDSDSEDEIEGLACENQSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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