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Report for CCDS43670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43670.1 Public Homo sapiens 7 OR2A12 24 110 108 CCDS HistoryNCBI Gene:346525Re-query CCDS DB by CCDS ID:43670.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408949.2 ENSP00000386174.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000408949.2Link to Ensembl Protein Viewer:ENSP00000386174.2Re-query CCDS DB by Nucleotide ID:ENST00000408949Re-query CCDS DB by Protein ID:ENSP00000386174
Original member Current member EBI ENST00000641592.1 ENSP00000493157.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641592.1Link to Ensembl Protein Viewer:ENSP00000493157.1Re-query CCDS DB by Nucleotide ID:ENST00000641592Re-query CCDS DB by Protein ID:ENSP00000493157
Original member Current member NCBI NM_001004135.2 NP_001004135.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004135.2Link to Protein Sequence:NP_001004135.1Re-query CCDS DB by Nucleotide ID:NM_001004135Re-query CCDS DB by Protein ID:NP_001004135Link to BLAST:NP_001004135.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004135.1 310 Q8NGT7 310 100% 0 0

Chromosomal Locations for CCDS 43670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 144095108 144096040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAAAGCAATCAGACCTGGATCACAGAAGTCATCCTGTTGGGATTCCAGGTGGACCCAGCTCTGGAGT
TGTTCCTCTTTGGGTTTTTCTTGCTATTCTACAGCTTAACCCTGATGGGAAATGGGATTATCCTGGGGCT
CATCTACTTGGACTCTAGACTGCACACACCCATGTATGTCTTCCTGTCACACCTGGCCATTGTGGACATG
TCCTATGCCTCGAGTACTGTCCCTAAGATGCTAGCAAATCTTGTGATGCACAAAAAAGTCATCTCCTTTG
CTCCTTGCATACTTCAGACTTTTTTGTATTTGGCGTTTGCTATTACAGAGTGTCTGATTTTGGTGATGAT
GTGCTATGATCGGTATGTGGCAATCTGTCACCCCTTGCAATACACCCTCATTATGAACTGGAGAGTGTGC
ACTGTCCTGGCCTCAACTTGCTGGATATTTAGCTTTCTCTTGGCTCTGGTCCATATTACTCTTATTCTGA
GGCTGCCTTTTTGTGGCCCACAAAAGATCAACCACTTTTTCTGTCAAATCATGTCCGTATTCAAATTGGC
CTGTGCTGACACTAGGCTCAACCAGGTGGTCCTATTTGCGGGTTCTGCGTTCATCTTAGTGGGGCCGCTC
TGCCTGGTGCTGGTCTCCTACTTGCACATCCTGGTGGCCATCTTGAGGATCCAGTCTGGGGAGGGCCGCA
GAAAGGCCTTCTCTACCTGCTCCTCCCACCTCTGCGTGGTGGGGCTTTTCTTTGGCAGCGCCATTGTCAT
GTACATGGCCCCCAAGTCAAGCCATTCTCAAGAACGGAGGAAGATCCTTTCCCTGTTTTACAGCCTTTTC
AACCCGATCCTGAACCCCCTCATCTACAGCCTTAGGAATGCAGAGGTGAAAGGGGCTCTAAAGAGAGTCC
TTTGGAAACAGAGATCAATGTGA

Translation (310 aa):
MESNQTWITEVILLGFQVDPALELFLFGFFLLFYSLTLMGNGIILGLIYLDSRLHTPMYVFLSHLAIVDM
SYASSTVPKMLANLVMHKKVISFAPCILQTFLYLAFAITECLILVMMCYDRYVAICHPLQYTLIMNWRVC
TVLASTCWIFSFLLALVHITLILRLPFCGPQKINHFFCQIMSVFKLACADTRLNQVVLFAGSAFILVGPL
CLVLVSYLHILVAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSSHSQERRKILSLFYSLF
NPILNPLIYSLRNAEVKGALKRVLWKQRSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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