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Report for CCDS57577.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57577.1 Public Mus musculus 7 Gvin2 23 108 98 CCDS HistoryNCBI Gene:100042856Re-query CCDS DB by CCDS ID:57577.1Re-query CCDS DB by GeneID:100042856See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57577.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106766.8 ENSMUSP00000102377.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106766.8Link to Ensembl Protein Viewer:ENSMUSP00000102377.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106766Re-query CCDS DB by Protein ID:ENSMUSP00000102377
Original member Current member EBI ENSMUST00000176467.7 ENSMUSP00000135898.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176467.7Link to Ensembl Protein Viewer:ENSMUSP00000135898.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176467Re-query CCDS DB by Protein ID:ENSMUSP00000135898
Original member Current member NCBI NM_001243039.1 NP_001229968.1 Accepted alive Link to Nucleotide Sequence:NM_001243039.1Link to Protein Sequence:NP_001229968.1Re-query CCDS DB by Nucleotide ID:NM_001243039Re-query CCDS DB by Protein ID:NP_001229968Link to BLAST:NP_001229968.1
Original member Current member NCBI NM_001243040.1 NP_001229969.1 Accepted alive Link to Nucleotide Sequence:NM_001243040.1Link to Protein Sequence:NP_001229969.1Re-query CCDS DB by Nucleotide ID:NM_001243040Re-query CCDS DB by Protein ID:NP_001229969Link to BLAST:NP_001229969.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229968.1 2427 Q80SU7 2427 100% 0 0
NP_001229969.1 2427 Q80SU7 2427 100% 0 0

Chromosomal Locations for CCDS 57577.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 105896560 105903843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (7284 nt):
ATGGCAACAGCAAAGTGTTTCACTGATGAGCCTCAGCTACAAAGCAGAAGGAAGCACAATCTCCAGGAGA
TGCTGACAGAAGTGGGACTGTCTGTTGACTACTGGTTACCTAAGCTTCAGGAAGATCTGGGTGTCACCTC
GGCCCAGGCCTTACAATATTTAGACAGGAATGACCTCCAGAAGCTGAAGTCCCAGACAACACACACATGG
GAGAAAAGGGCGCTGGAGAAGTTACTGGACTTCTCACAGCCAAACAGTGTTGCAGAGCTACAGGAGACTC
CAAGGGAGATGAAAAAGAACAGGCAGAGGCAGGCAGGACAAGCACTGCAGGCTCTGAAAGCCTTGCAGTC
AGAAGGGAAGCACAGAGAGGAAGAGGCAGTGAGGAGAAAAGAAGCAGAGCTGAGACAAGCAATGGAGATC
CCTGAGGAGTGCTGGCCAACGGCTGAAGTGTCCCTAAAAGACATCACTGAAATAATGGAGAGACATCTCA
GTCACATGGAACGGACCCTGGCTCACAGTCCAAACCTCTCAGATGGAGACCTGGTAAGATGGGCATCTGG
AGGGCTGGCTCTGCAGGGAATTTATAAGACCAACCACCCAAGAAGCCTGATTCAGAAGAGAGAAGAGCTA
CTCAGTGTCCCTAAGCAGTTCTCACTTGTTGGCCCAGAACATGGCACCGAAATAAAAACGATGGAATTTT
CATCTTTTCACGAACAAGCCATGTTTACAGAGACTATAAAGATGATGGGTTTCAGTTCAACCTCCTTGGT
TAAAGGCGAAGGATGGGGATTTAGTCTAGAAGCTGGTATAGATCAAAACGAACAGACAGCATCTGAGAAT
ACACACCAATCCCATTCAGAGCAAACTTATTTTTGCTCAGCCAGGTTCAGCTACATCCCATTGGCCACGT
GCCATTTTCACATCAATGATCTTGAACTCTCCAATGCTGCTCTCCAGGAACTAAAAACTATTGAAGAACT
CCTGGAGCAGACAACAGACCACCGAGATGGACTACCCTTACTAAGGCACAGGGCTGAAAACTTTTTCCAT
AGGTTTGGCTCTCATGCTAACCAAGGCCCTCTGCAACTGGGTGGAATCTACTGCTGGAAAGCCATTTCAG
AAGGTTTCAAAAGTGAGCACTTGGCTGATGTAAAGCAGCAAACAAGAGAGTCTTTGAATATTTACATTAT
GGGCAGTTATAGTGGCTTTGGAGTTAAAGTCGGTGCAAGTGTTAATATAGCAAACTCAAATTCAGAAACA
GCATCATTCAGTACAACTCATCTACACTCTCAAACCAAGGTACAACTATCTGTAGCCCAGATAGGTGGAC
CAGCAGAAGCAGATGGAATTGCCCAGTGGACAGCTGGCCTTGTAGTTAGCAATCAAACCTGGTCTGTCAT
TGATAGGGAACTGCAGTTGGTACCTATTTGGGACATCATCCTGTCTAGCCACAGAACTGATTTTAAGAAT
GCTCTTCAAGTGGCTAACTGCCTAAAAGACAACTACACTGCTCTGACTGAACTAGATGCCCAGATTCAAG
AGGGGGAAGAATTTCTGACTGCTAGAAAAGAAGCTAAGCTTTTCATAGAGGATGTGAAATGCTGGGAGGT
TTCTGATCCTGAAGAACAACTTACAAAGTTATTAGATTTTATGCAAACATTGAGTCAAAAAATAAAAAGT
TATAACATTTGGATTAATACATGTCTCACTGATTGGGATCTGCAGAATTTTCTAATAAATACTGTAAAGT
TCTGCAAAACTTCACCCACTTATAAAACTCAGTTTATTAAATCTCAGTTGTGCATCCTTCTAGAACCTCA
TGTCTACAAAGTTACAAACTTTCCTGAGGCACACTCCATCATACAGTGGATCAATCAGTCAGAGTATGGG
GAAGAGCAAGTCAAAATCACCTCATTTTCTGAATTCATTAAGACCTTAAAGAAAACCCACAAATACCTGA
TGGAAGTGAATTTCAAAAATGAGGCCCCAGAAACAGTGGAAGAAGCAGAAAGAACGGCTACATATGAGGT
CACCACAGCTCTCAGCTCCTTCTTGAAGTACCTCAAAGAAACAGAACAGCCAGACATGCAGCTGCTGCTG
CTTTCCATTGCAGCTGGTGCAGGCTATCAGTTGGTAAACAGTATTTTTCAGCATCTTCTGGGGTGTGATG
AGTTAAACTTCCTCTTGGATCAAATGCAAAGTAACCAACACAAATACCAAGAGCTTAAAAATATTTGCAA
CTACAGAGCCCAGGCATTCCTGGTGCTCACAGCTCTAAGAACCACAGTTGAAATCACAGATATTTCTACA
GAAGAGAAAAGACAACGTTTGGCATTAATTAAACAACATATGGGGACACTGTTGTCTGAAGAAGTTGCAC
ATGTTCTCACAAAACATGGAGAACATCATGACTGGGAAAGTCTGGAGAATGATTTGAGACTACTCATTGA
GGGGGACTATAAAGCCACCACCCATTACTTACAAATGGATGAGGTAAAAAAACAATTGCAAAGTCTCTGC
CATGGAAAGAAACAGACCTATAAACAAAAAAGTAATGAAAACATCACAAAAGGAATGATAGAAAATGGAC
CTTTCCTGAAATTACTCCAACGTCTAGGCCTAGACAATTACTATCCAAAAAGGATGAGCAGAGCTGACTT
CCATCTGATCTATAAGACCTCTGTGTACAATTCACAGCCAAGGTCTGAAAAGGAGCTTCCATTCTATTTC
CTACAAAAGCTACTGATGTTGGATTATGGGTTCAGACATCTGATAGTCAAAGATGATGAAAACATAAAAA
AACAAATCTCCATAGGTTCCTCCAATCACGAAAATGAAGATATTGATCCATATGACGATGTCATTATAGA
CAATGATAGTCCTGGCTATCCTTCAGCCACTGAGTCCTGGCCCCACATTCACCCATTGGATATCCAGATG
ACCATTTTACACTGTGCAGATGATCTTACCAGGCAATATATTTTCTCTAAACTTTCCATTTGTCATTATG
CACTCCCCCTTGTGGTACCAAATCCCAACACTTCTCAGATTGAATTTTATCTTTGGTCTCTCAGACAAAT
TAGGAAAAGTTGGCAAGATGCAAGTAAATCTCCACAGGACAAGAGCTACAGTCACAGAAATCAGCAGATG
TGTCGTGTCTCTACCCCCATTGTGTCCTTCATTAGAGTTGGAAATGACCTCTCTGCTTCCAAATCTCAGA
TCATGAACTCTCTTCTCAGTAAACGTAAACATGACGTGTTTTTTCACAGACACTGCAAAGGAAGCAACAA
ACACTGTCTCCTGATGCAGGGAGTGGTGGAAATCTGCTGGTTCTGTCCTGCCGGCCAAGGTGAGGACACG
TTTGAAAATTGTCTGACCTTCACCAGTCTTCATGGAGATGCAAAGGAACACACCCAACAACTCAGCTTCC
TCCAACATGTCTCTTCTATCATTGTGGTCCTCATGTCAGTTTCTGATAACAATAAAGAAAACCAAAAGCT
TGTCAGACACCTCTGGCAGTCATCAACACCTTTGATCTGCTTGATTGATGACAAAGAAAAGGCCATAGCA
AATACTTCTGGTAAAAGAATGAGAATTGGCATCAAGAATAGAAATGAGGCAGAATTAACAGAGGAGCTCA
CCAATGCCATCAAACATTTTCTAGAGCTCTCTAACACTGTTCTCAGTTTAGAGGACTGTTCACAGACAGC
TAGAGAGCTAGGATTCATTATTGATGAAGACCAGAGAGACTGCAAGGAAGCCAAAGAAAAGGCTCAGACT
GTAATGGCCCTCCTGGAGGAATACAAGTTATCTCAGACAAAAGAAAATTTACTACCCCTTCAAGGACAAC
TTTGGCACCTTTGGTGTAAGAAAGACAAAGAATTCTATCATCTGAGAGAAAAGGGGAATCGGAGCATCGA
ACAACACAAGAGTGAGATTGAAACACATAAAAGAAAAATTCGACGTCAACAGTTGGAAAAAGCCTTTCCT
CTCAATGATTTAATGCGCTCTGTTCTCGAACTCCTCCAAGACTATTCAGAAACACATAACAAACTCTACG
TTTTGCAGTGGCTCACTCTGTTTTTTGACAACCTGACAATAGATCACCTGGACAAATTACATGAAAGGCA
GAGATCTTTGTGGTTAAGGATACAAACAGAAAAGCAAAGAGCACAGAAGAGCAACTCTGTGCAGAATCAG
ATAGAAGCCATCTCCACAGAGATTCATAACTGTACTTTAGGAATTGAGCACCTTCTCCGAGAAGTTGGCC
AGATCTATGAAGCTCTGGAAGAAACTTCCTCCTCTAGAGATAGCCTTTTTCTCTGCCTCCCTCAAATTGC
TGCAGACCTGATGATAGCTGGTGTTCCCATTGAGCTGATGGACGGGGATGCTTCATATGTGCCTCTAAAG
TGGGTAGCAGCTATTTTTGACAAGATCACAGAGAAAGTTGGAGACAAAAGGCTGTTTGTTCTCTCTGTCC
TTGGCCTGCAGAGCTCAGGGAAGTCTACCCTACTGAATGCCCTGTTTGGCCTACAGTTCACAGTCAGTGC
AGGCAGGTGTACCAAGGGGGCCTACATGCAGCTCCTGAAGGTGGAAGAGACATTCACAGAAGAACTTGGC
TTTAATTATGTGCTTGTTATAGACACAGAAGGACTTCGAGCTCCAGAACTCAACAACAAATCCCAGAATT
GGGACCATGAGTTGGCAACATTAGTCATTGGCCTTGGAAACTTGACTCTGATCAATATTTTTGGGGAGAA
TCCCTCAGACATTCAGGACATTCTACAAATATCTGTTCAAGCATTTCTGAGAATGAAACAAGTGAAAATC
TCCCCCAGTTGCCTCTTTGTCCATCAGAATGTGGGAGAAGTTACAGCAAAAGACCAAACTATGGAAGGAC
GGAAGAGACTGGAGCAGAAACTGGATGAAATGACTGCATTGGCTGCTGAGTTGGAAGAGTGTTCCAACAT
AACCCGCTTCAGTGATGTAATTAAGTTTGATGCCAATCGACATGTCTACTACTTTGCTCACCTATGGGAT
GGCAATCCCCCAATGGCTCCTCCCAATCCTCGCTATAGCTACAATGTCCAGGAACTAAGGAATGAAATTC
TTTCAACTGCCCAGCAGGAATCTAGGGGAAGGATCTTGAAAATATCAGATTTCAAATTCAGAGTTCAAGA
TTTGTGGAAAGCCCTTGTCAGTGAAAACTTCATTTTCAGTTTCAGGAACACCCAAGAGGTCATAGCCATG
AGCAAACTGGAAACAAAGTATAATGAATGGACCTGGGAGCTAAGGAGTCATGTACTGGACTTACAGAATC
AGCTTGACAATCAGATTCAAAATGGAAAAATCCTGACACTCACATCTAATTTACTAGAGGAACCACTTAG
CAGGAAACTTAAAACCATCAAAGAAGAATTTGACAAATATTTTGAAGAAGACCCAGATTGTGAAATATTG
GTTCAGTGGAAAGCAAATTTTGAACACAAGTTACTAATCCTTAAAGATTCACTTATTTCAGACACCAGAC
AGAAATGCAATGAACATATCAGTCTTAAAAATAGCCAAGAAATACTTGATAACCAAAAGTCACAATATGA
AAATCAGTTGTTAGAGAGGAGCAGAAAGTTAGCTTTAAATTTGAAGGGTAAGGAATTAAGTGATGAAGAG
TTGCATGAGAAATTCAGGCAACTTTGGACAAGTTGGATTTATGATGTATCTTCCAATGTTCCTCATGTCA
CAGAGCCTAACATTGATTTGGACTCTGAAAATATCCTTCTGGAATATTTCAAGAAGGACAAAAATATTGT
GGAAAGACTAAAAATAAAGTCTCAAGGAAAGTTTGAAATCATGTATGACAAACATATTCAAATGAAAAAG
AAATACCTTTTACTTAGAAAGAGTTTAGAAACCTGTCATGTTGAATCCATCAAAAAGACAACCAACAACA
TTCAGTTAAAATTTACAGAAACACTTACAAACATTTGGAAACAAAAGCGTGATTACAGTCAGAATTACTT
TCATGAAATCTTGAGGATCATAGAAAATGAGCTGAAATCTGAACCCTGTGAGGGAGACTACACATTTACC
AAAGACTACATCATTGACTTATCCTTGTACTTATTCCAAAGAGCATCCAAGGATTTCAAGAAAATGCACG
CGGCATTCAAGACTGCAAATGACCCTGTGAACTATCTGGAGAGAAAGAAAGATGATTTCTTTATGAGTTT
TAAGATCTCCTGCCAAGGTGCCACTTCAATCACTTCCTTTGTTGACTTCCTATGGCTCAAGCTCACTCCT
GCTATCTCTGTCAGCATATGGAAAATAATGGTTCAAAAAATAGCTGGAGACATGCGAGCCACCTGCCCTG
AATTCAATGGAAACAGAGCTAACCTGGAGATACATATTCTCTACTCTCTAGCAGAAGAAGAAAAATTTGA
TAAATACTGGAAATACATTCAAAAGCCAGAGGAATTTTTCAGGGATTATATTAGAGACCACATTAAAAGA
TACTGTTCAGAAAAAGAGAGTGAAAAAATAAAAACTTTTTTAAACATAAGCTTAGGTGACATCAAGAATA
CTATCCTGTCTGCCATTCATAACTCCACAAAGGTAGCTAAAGCTAAAGGCAGCACTGCATCTCACTGGCT
GGATTTGTTCTGTGACCACCTAGGGAGCAACCTGGTCTTCCCAAGGAAAGACCTGGTAAGCATAGAGCAC
CAGGAGCTAATGGATACTGAGTTCCTCAAAGAAGCCATGAGCAAAGCTTTGGATCCTGCAATGAGGGAAG
TAGAAGAGGATTGTTCAAGTAAGCACATAGATGAAATTGTTCCTGACATTGAGAAAATTCTCTCTGAACA
TCTCTGTGGCTGTTGGAAACAGTGTCCTTTTTGTAAGGCAATTTGTACAAACACCATTCCCCAGCATGAA
GGAGACCACAGTGTGCCATTCCACCGTCCTCAGGCTGTCAGTGGTTGGCATTGGCATAAAACAGACCAGT
TCCACATTAATGTTTGTACTAGTAGTGTAGCAAGTAATATTTCCTTCATTTTAGATGGCTTCCGGGAATT
CCCATTCAAGAAATATCGAGAAGCAGGAGGTGATTATGCCACATGGAGCATCACCCCAGACTCATCTACC
CAGCCATATTGGAAATGGTTTGTCTGTCATTTCAGATCAAACCTAGAAGAGAATTATGGCAAAAAATTTA
CAGGGAAAGGTAGTCTTCCAGATTTATGGACCAAAATCACAAAGCAAGAAGTCCTGAATGACTTAAAAAA
ATAA

Translation (2427 aa):
MATAKCFTDEPQLQSRRKHNLQEMLTEVGLSVDYWLPKLQEDLGVTSAQALQYLDRNDLQKLKSQTTHTW
EKRALEKLLDFSQPNSVAELQETPREMKKNRQRQAGQALQALKALQSEGKHREEEAVRRKEAELRQAMEI
PEECWPTAEVSLKDITEIMERHLSHMERTLAHSPNLSDGDLVRWASGGLALQGIYKTNHPRSLIQKREEL
LSVPKQFSLVGPEHGTEIKTMEFSSFHEQAMFTETIKMMGFSSTSLVKGEGWGFSLEAGIDQNEQTASEN
THQSHSEQTYFCSARFSYIPLATCHFHINDLELSNAALQELKTIEELLEQTTDHRDGLPLLRHRAENFFH
RFGSHANQGPLQLGGIYCWKAISEGFKSEHLADVKQQTRESLNIYIMGSYSGFGVKVGASVNIANSNSET
ASFSTTHLHSQTKVQLSVAQIGGPAEADGIAQWTAGLVVSNQTWSVIDRELQLVPIWDIILSSHRTDFKN
ALQVANCLKDNYTALTELDAQIQEGEEFLTARKEAKLFIEDVKCWEVSDPEEQLTKLLDFMQTLSQKIKS
YNIWINTCLTDWDLQNFLINTVKFCKTSPTYKTQFIKSQLCILLEPHVYKVTNFPEAHSIIQWINQSEYG
EEQVKITSFSEFIKTLKKTHKYLMEVNFKNEAPETVEEAERTATYEVTTALSSFLKYLKETEQPDMQLLL
LSIAAGAGYQLVNSIFQHLLGCDELNFLLDQMQSNQHKYQELKNICNYRAQAFLVLTALRTTVEITDIST
EEKRQRLALIKQHMGTLLSEEVAHVLTKHGEHHDWESLENDLRLLIEGDYKATTHYLQMDEVKKQLQSLC
HGKKQTYKQKSNENITKGMIENGPFLKLLQRLGLDNYYPKRMSRADFHLIYKTSVYNSQPRSEKELPFYF
LQKLLMLDYGFRHLIVKDDENIKKQISIGSSNHENEDIDPYDDVIIDNDSPGYPSATESWPHIHPLDIQM
TILHCADDLTRQYIFSKLSICHYALPLVVPNPNTSQIEFYLWSLRQIRKSWQDASKSPQDKSYSHRNQQM
CRVSTPIVSFIRVGNDLSASKSQIMNSLLSKRKHDVFFHRHCKGSNKHCLLMQGVVEICWFCPAGQGEDT
FENCLTFTSLHGDAKEHTQQLSFLQHVSSIIVVLMSVSDNNKENQKLVRHLWQSSTPLICLIDDKEKAIA
NTSGKRMRIGIKNRNEAELTEELTNAIKHFLELSNTVLSLEDCSQTARELGFIIDEDQRDCKEAKEKAQT
VMALLEEYKLSQTKENLLPLQGQLWHLWCKKDKEFYHLREKGNRSIEQHKSEIETHKRKIRRQQLEKAFP
LNDLMRSVLELLQDYSETHNKLYVLQWLTLFFDNLTIDHLDKLHERQRSLWLRIQTEKQRAQKSNSVQNQ
IEAISTEIHNCTLGIEHLLREVGQIYEALEETSSSRDSLFLCLPQIAADLMIAGVPIELMDGDASYVPLK
WVAAIFDKITEKVGDKRLFVLSVLGLQSSGKSTLLNALFGLQFTVSAGRCTKGAYMQLLKVEETFTEELG
FNYVLVIDTEGLRAPELNNKSQNWDHELATLVIGLGNLTLINIFGENPSDIQDILQISVQAFLRMKQVKI
SPSCLFVHQNVGEVTAKDQTMEGRKRLEQKLDEMTALAAELEECSNITRFSDVIKFDANRHVYYFAHLWD
GNPPMAPPNPRYSYNVQELRNEILSTAQQESRGRILKISDFKFRVQDLWKALVSENFIFSFRNTQEVIAM
SKLETKYNEWTWELRSHVLDLQNQLDNQIQNGKILTLTSNLLEEPLSRKLKTIKEEFDKYFEEDPDCEIL
VQWKANFEHKLLILKDSLISDTRQKCNEHISLKNSQEILDNQKSQYENQLLERSRKLALNLKGKELSDEE
LHEKFRQLWTSWIYDVSSNVPHVTEPNIDLDSENILLEYFKKDKNIVERLKIKSQGKFEIMYDKHIQMKK
KYLLLRKSLETCHVESIKKTTNNIQLKFTETLTNIWKQKRDYSQNYFHEILRIIENELKSEPCEGDYTFT
KDYIIDLSLYLFQRASKDFKKMHAAFKTANDPVNYLERKKDDFFMSFKISCQGATSITSFVDFLWLKLTP
AISVSIWKIMVQKIAGDMRATCPEFNGNRANLEIHILYSLAEEEKFDKYWKYIQKPEEFFRDYIRDHIKR
YCSEKESEKIKTFLNISLGDIKNTILSAIHNSTKVAKAKGSTASHWLDLFCDHLGSNLVFPRKDLVSIEH
QELMDTEFLKEAMSKALDPAMREVEEDCSSKHIDEIVPDIEKILSEHLCGCWKQCPFCKAICTNTIPQHE
GDHSVPFHRPQAVSGWHWHKTDQFHINVCTSSVASNISFILDGFREFPFKKYREAGGDYATWSITPDSST
QPYWKWFVCHFRSNLEENYGKKFTGKGSLPDLWTKITKQEVLNDLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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