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Report for CCDS55559.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55559.1 Public Homo sapiens 1 FNDC10 24 110 108 CCDS HistoryNCBI Gene:643988Re-query CCDS DB by CCDS ID:55559.1Re-query CCDS DB by GeneID:643988See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55559.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422725.4 ENSP00000389111.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000422725.4Link to Ensembl Protein Viewer:ENSP00000389111.1Re-query CCDS DB by Nucleotide ID:ENST00000422725Re-query CCDS DB by Protein ID:ENSP00000389111
Original member Current member NCBI NM_001242659.2 NP_001229588.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001242659.2Link to Protein Sequence:NP_001229588.1Re-query CCDS DB by Nucleotide ID:NM_001242659Re-query CCDS DB by Protein ID:NP_001229588Link to BLAST:NP_001229588.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229588.1 226 F2Z333 226 100% 0 0

Chromosomal Locations for CCDS 55559.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1599335 1600015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGCGCGCCCCGCCGCTGCTGCTGCTGCTGGCCGCCTGCGCGCCGCCGCCCTGCGCCGCGGCCGCCCCGA
CGCCGCCGGGCTGGGAGCCGACCCCCGACGCGCCCTGGTGCCCCTACAAGGTGCTGCCCGAGGGCCCCGA
GGCGGGCGGCGGGCGCCTGTGCTTCCGCAGCCCCGCGCGCGGCTTCCGCTGCCAGGCTCCGGGCTGCGTG
CTGCACGCCCCGGCCGGCCGCTCCCTGCGCGCCAGCGTCCTGCGCAACCGCAGCGTCCTCCTGCAGTGGC
GCCTGGCCCCGGCCGCCGCGCGCCGCGTGCGCGCCTTCGCGCTCAACTGCTCGTGGCGCGGCGCCTACAC
GCGCTTCCCGTGCGAGCGCGTGCTCCTCGGGGCCTCCTGCCGCGACTACCTGCTGCCCGACGTGCACGAC
AGCGTCCTCTACCGCCTGTGCCTGCAGCCGCTGCCGCTGCGCGCTGGGCCCGCCGCCGCCGCGCCAGAGA
CCCCCGAGCCGGCCGAGTGCGTGGAGTTCACCGCCGAGCCGGCCGGCATGCAGGACATCGTGGTGGCCAT
GACGGCGGTGGGCGGCTCCATCTGCGTCATGCTGGTGGTCATCTGCCTGCTGGTGGCCTACATCACCGAG
AACCTCATGCGCCCGGCCCTCGCGCGCCCCGGCCTGCGCAGACACCCCTGA

Translation (226 aa):
MRAPPLLLLLAACAPPPCAAAAPTPPGWEPTPDAPWCPYKVLPEGPEAGGGRLCFRSPARGFRCQAPGCV
LHAPAGRSLRASVLRNRSVLLQWRLAPAAARRVRAFALNCSWRGAYTRFPCERVLLGASCRDYLLPDVHD
SVLYRLCLQPLPLRAGPAAAAPETPEPAECVEFTAEPAGMQDIVVAMTAVGGSICVMLVVICLLVAYITE
NLMRPALARPGLRRHP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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