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Report for CCDS29209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29209.1 Public Mus musculus 18 Grxcr2 23 108 98 CCDS HistoryNCBI Gene:332309Re-query CCDS DB by CCDS ID:29209.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29209.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097591.4 ENSMUSP00000095198.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097591.4Link to Ensembl Protein Viewer:ENSMUSP00000095198.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000097591Re-query CCDS DB by Protein ID:ENSMUSP00000095198
Original member Current member NCBI NM_001033426.3 NP_001028598.1 Accepted alive Link to Nucleotide Sequence:NM_001033426.3Link to Protein Sequence:NP_001028598.1Re-query CCDS DB by Nucleotide ID:NM_001033426Re-query CCDS DB by Protein ID:NP_001028598Link to BLAST:NP_001028598.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028598.1 254 Q3TYR5 254 100% 0 0

Chromosomal Locations for CCDS 29209.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 41986509 41986688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 41991757 41992005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 41998667 41999002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGGAGGACTCCGAGAAGAAACTGAATCAGAAGAGCGACGACAAACCCAGAAAAGTCCGGTTTAAAATCT
CCTCTTCCTACAGTGGCCGAGTGTTGAAGCAGGTTTTTGAGGATGGGCAAGAATTAGAGTCGCCCAAAGA
AGAATATCCTCACAGTTTTCTCCAGGAGGCCCTTGAACCAATGGATGGCGTTTATGGGTCTGGGGAAGTC
CCCAAGCCCCAGCCGTACTCCCCCAAGCTGACTGCTCAGAGAATCAGCGTATTCAGAGACAGCGGCGCCT
ACACTCTGGCGGGCAGCCAGCCTCTGTTCAATGACTACAAGGCGAATGACCATAAGCCTCCACCCATTAT
AGACTTTGGGAAGATAATTATCTATACCAACAACCTGAAAATCATCCGAACCCCGATGGACAAAAGGGAC
TTCATGAGGAAAATCCTCCAAAAGGAAGATGTGGCTGAGGAAGCGTCCCTGATGATCACAGGGGAGAATG
ATGGAGACAGGGAGCAAGGCTGCCCCCTGCCGGAGCGGAACGGCAGCCCCCTGCCGGAGTCGGAGCGCAC
ATTTCTTCATAGTCAGCACACACAGGATGGGTTGGTCCCTGAGGACTGCCTCCACTGCCAGGGGTCTGGC
ATTGCCACCTGTTCTCTGTGCCACGGCAGCAAGTTCTCCATGCTGGCTAACAGATTCAAGGAGTCCTACC
GAGCCCTCAGGTGCCCTGCCTGCAACGAGAATGGCCTGCAACCTTGCCGAATTTGCAGCCCATAG

Translation (254 aa):
MEDSEKKLNQKSDDKPRKVRFKISSSYSGRVLKQVFEDGQELESPKEEYPHSFLQEALEPMDGVYGSGEV
PKPQPYSPKLTAQRISVFRDSGAYTLAGSQPLFNDYKANDHKPPPIIDFGKIIIYTNNLKIIRTPMDKRD
FMRKILQKEDVAEEASLMITGENDGDREQGCPLPERNGSPLPESERTFLHSQHTQDGLVPEDCLHCQGSG
IATCSLCHGSKFSMLANRFKESYRALRCPACNENGLQPCRICSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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