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Report for CCDS2389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2389.1 Public Homo sapiens 2 ACADL 24 110 108 CCDS HistoryNCBI Gene:33Re-query CCDS DB by CCDS ID:2389.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000233710.4 ENSP00000233710.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000233710.4Link to Ensembl Protein Viewer:ENSP00000233710.3Re-query CCDS DB by Nucleotide ID:ENST00000233710Re-query CCDS DB by Protein ID:ENSP00000233710
Original member Current member NCBI NM_001608.4 NP_001599.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001608.4Link to Protein Sequence:NP_001599.1Re-query CCDS DB by Nucleotide ID:NM_001608Re-query CCDS DB by Protein ID:NP_001599Link to BLAST:NP_001599.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001599.1 430 P28330 430 100% 0 0

Chromosomal Locations for CCDS 2389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 210188961 210189054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210192804 210192890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210195211 210195338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210203331 210203444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210204581 210204682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210205632 210205796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210210196 210210262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210216347 210216511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210217965 210218102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210220647 210220802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210225187 210225263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGGCCGCACGCCTTCTCCGAGGGTCCCTACGCGTCCTGGGCGGCCACCGTGCGCCGCGCCAGCTGCCCG
CCGCGCGATGTTCTCATTCCGGAGGGGAAGAACGTCTAGAAACTCCTTCTGCTAAAAAATTAACAGATAT
AGGAATTCGAAGAATCTTTTCTCCAGAGCATGACATTTTCCGGAAAAGTGTAAGGAAGTTTTTCCAAGAA
GAAGTGATTCCTCATCACTCAGAATGGGAGAAAGCTGGAGAAGTAAGTAGGGAGGTTTGGGAAAAAGCTG
GAAAACAAGGACTGCTTGGTGTCAATATTGCAGAGCATCTTGGTGGAATTGGAGGGGATCTGTACTCCGC
AGCTATTGTCTGGGAGGAGCAAGCTTATTCAAATTGTTCAGGCCCAGGTTTTAGTATTCATTCAGGTATT
GTCATGTCCTATATTACAAACCATGGCTCAGAAGAACAGATTAAGCACTTTATTCCCCAGATGACTGCAG
GCAAATGTATTGGTGCAATAGCAATGACAGAGCCTGGAGCTGGAAGTGACTTACAGGGAATAAAAACAAA
TGCTAAAAAGGATGGAAGTGACTGGATTCTCAATGGAAGCAAGGTGTTCATCAGTAATGGGTCATTAAGT
GATGTTGTGATTGTAGTTGCGGTCACAAATCATGAAGCTCCCTCCCCTGCCCATGGTATTAGCCTTTTTC
TGGTGGAAAATGGAATGAAAGGATTTATCAAGGGACGAAAGCTACATAAAATGGGATTAAAAGCCCAGGA
TACCGCAGAACTATTCTTTGAAGATATACGGTTGCCAGCTAGTGCCCTACTTGGAGAAGAGAATAAAGGC
TTCTATTACATCATGAAAGAGCTTCCACAGGAAAGGCTGTTAATTGCTGATGTGGCAATTTCAGCTAGTG
AATTCATGTTTGAAGAAACCAGGAACTATGTTAAACAAAGAAAAGCTTTTGGCAAAACAGTTGCTCACCT
ACAGACAGTGCAACATAAATTAGCAGAATTAAAAACACATATATGTGTAACCCGAGCATTTGTGGACAAC
TGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGCTTGCATGGCGAAATATTGGGCATCTG
AGTTACAAAATAGTGTAGCTTACGACTGTGTACAGCTCCATGGAGGTTGGGGATACATGTGGGAGTACCC
AATTGCAAAAGCTTATGTGGATGCCAGAGTTCAGCCAATCTATGGTGGTACAAATGAAATAATGAAGGAG
CTGATTGCAAGAGAGATTGTCTTTGACAAGTAG

Translation (430 aa):
MAARLLRGSLRVLGGHRAPRQLPAARCSHSGGEERLETPSAKKLTDIGIRRIFSPEHDIFRKSVRKFFQE
EVIPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGPGFSIHSGI
VMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLS
DVVIVVAVTNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKG
FYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFVDN
CLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKE
LIAREIVFDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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