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Report for CCDS24034.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
24034.2 |
Public |
Mus musculus |
10 |
Jsrp1 |
23 |
108 |
98 |
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Public Note for CCDS 24034.1 |
The coding region has been updated to represent an alternative splicing pattern, resulting in a longer N-terminus that is more supported by the available transcript and conservation data. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 24034.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000181039.7 |
ENSMUSP00000137666.1 |
Accepted |
alive |
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NCBI |
NM_028001.3 |
NP_082277.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_082277.2 |
332 |
Q3MI48-1 |
332 |
99.6988% |
0 |
1 |
Chromosomal Locations for CCDS 24034.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (999 nt): ATGACTACCAGAGGCCTGGAGGACCTGGATGGGGGCCTGGGCAGCTGCCTCCCCAGTGATGACCTCCCAT TTCTGGAGGAACCAGCCTCAGGCCGGCGGCCAGAGAGCAAGGCTCGAGGGACATCCAGGCGGGCCGACTC CAGTGACTGGACCCATGTCCTTCAGGACCCAGTTGCTGCTGGCGCTGGGGATGCCGGGCTCAAGAAGATG GAAAAAGAGCTAGCGGGCAAGGAGAGCACAGCTGGCAAAGCGGGAACAAGCCCCCGGATCGTTCCTGCAC GTAGGAAGCCGCAGGCTCCGCCTCCCCTGCAGCCGCCCCCGCCTCCCCTGCAGCCGCCCCCAAGGACGCC AAGCGATGACCTGCCCTGGGGAGATCTGACGCTCAACAAGTGCCTGGTACTGGCCTCGCTGGTGGCCCTG CTGGGCTCGGCTCTTCAGCTGTGTCGGGACGCAGTGGCTGGGGAGGTCGTGGCTGCCCCTCACCCATGGG TCCCGCCCAGCTCTCCACCAAAGAAGGAAGCGTCGCCAGCGCCTAAGCCTCCGGTTTTGGTGTCTCCATC CGGGTCTCCTCAGCCGAAGCCTGGGCCACCCCAGGCACGGATGCAGGATGAGCCTGAGCTTCCCGGGAGC CCTGAAGCTACAGAAACCCGGGTAGAACGTGGAGGGTCCATCTCGGAAGCCTCTGGGGAGGAGAGCGTAC CCCTTGGGGACCGAGGGTCCCAGGAGAAGCCACGGAAAGAGAAGCCAAGTAAAGGGGAGAAACTGAAGAA GGAGAAGCCGAGAAGGGAGAAGCCGAGGAGAGAGGATAAGTCACAGGTCACTGGGGAGCCCCGTCAATCA CTGCCACGGCGCTGGGAGGCGCGGGAAGGAGGCCGTCGGCCATGGGGACGGGACTCCAGGGACCTCCTCG AGCATGGGAAGCTGCAGGCCTGGGCTCCCCGGCGAAGGCATGACCGTGATGACCGGCCCAGACAGAAGCG AGGGAAGGGGCGTGACTGA
Translation (332 aa): MTTRGLEDLDGGLGSCLPSDDLPFLEEPASGRRPESKARGTSRRADSSDWTHVLQDPVAAGAGDAGLKKM EKELAGKESTAGKAGTSPRIVPARRKPQAPPPLQPPPPPLQPPPRTPSDDLPWGDLTLNKCLVLASLVAL LGSALQLCRDAVAGEVVAAPHPWVPPSSPPKKEASPAPKPPVLVSPSGSPQPKPGPPQARMQDEPELPGS PEATETRVERGGSISEASGEESVPLGDRGSQEKPRKEKPSKGEKLKKEKPRREKPRREDKSQVTGEPRQS LPRRWEAREGGRRPWGRDSRDLLEHGKLQAWAPRRRHDRDDRPRQKRGKGRD
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