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Report for CCDS4792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4792.1 Public Homo sapiens 6 RPS10 24 110 108 CCDS HistoryNCBI Gene:6204Re-query CCDS DB by CCDS ID:4792.1Re-query CCDS DB by GeneID:6204See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4792.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621356.3 ENSP00000481646.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621356.3Link to Ensembl Protein Viewer:ENSP00000481646.1Re-query CCDS DB by Nucleotide ID:ENST00000621356Re-query CCDS DB by Protein ID:ENSP00000481646
Original member Current member EBI ENST00000467531.5 ENSP00000494190.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000467531.5Link to Ensembl Protein Viewer:ENSP00000494190.1Re-query CCDS DB by Nucleotide ID:ENST00000467531Re-query CCDS DB by Protein ID:ENSP00000494190
Original member Current member EBI ENST00000464218.5 ENSP00000494440.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000464218.5Link to Ensembl Protein Viewer:ENSP00000494440.1Re-query CCDS DB by Nucleotide ID:ENST00000464218Re-query CCDS DB by Protein ID:ENSP00000494440
Original member Current member EBI ENST00000648437.1 ENSP00000497917.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648437.1Link to Ensembl Protein Viewer:ENSP00000497917.1Re-query CCDS DB by Nucleotide ID:ENST00000648437Re-query CCDS DB by Protein ID:ENSP00000497917
Original member Current member NCBI NM_001014.5 NP_001005.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001014.5Link to Protein Sequence:NP_001005.1Re-query CCDS DB by Nucleotide ID:NM_001014Re-query CCDS DB by Protein ID:NP_001005Link to BLAST:NP_001005.1
Original member Current member NCBI NM_001203245.3 NP_001190174.1 Accepted alive Link to Nucleotide Sequence:NM_001203245.3Link to Protein Sequence:NP_001190174.1Re-query CCDS DB by Nucleotide ID:NM_001203245Re-query CCDS DB by Protein ID:NP_001190174Link to BLAST:NP_001190174.1
Original member Current member NCBI NM_001204091.2 NP_001191020.1 Accepted alive Link to Nucleotide Sequence:NM_001204091.2Link to Protein Sequence:NP_001191020.1Re-query CCDS DB by Nucleotide ID:NM_001204091Re-query CCDS DB by Protein ID:NP_001191020Link to BLAST:NP_001191020.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005.1 165 P46783 165 100% 0 0
NP_001190174.1 165 P46783 165 100% 0 0
NP_001191020.1 165 P46783 165 100% 0 0

Chromosomal Locations for CCDS 4792.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 34417506 34417547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34418369 34418424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34421730 34421807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34424669 34424840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34425072 34425221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (498 nt):
ATGTTGATGCCTAAGAAGAACCGGATTGCCATTTATGAACTCCTTTTTAAGGAGGGAGTCATGGTGGCCA
AGAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAGAATGTGCCCAACCTTCATGTCATGAA
GGCCATGCAGTCTCTCAAGTCCCGAGGCTACGTGAAGGAACAGTTTGCCTGGAGACATTTCTACTGGTAC
CTTACCAATGAGGGTATCCAGTATCTCCGTGATTACCTTCATCTGCCCCCGGAGATTGTGCCTGCCACCC
TACGCCGTAGCCGTCCAGAGACTGGCAGGCCTCGGCCTAAAGGTCTGGAGGGTGAGCGACCTGCGAGACT
CACAAGAGGGGAAGCTGACAGAGATACCTACAGACGGAGTGCTGTGCCACCTGGTGCCGACAAGAAAGCC
GAGGCTGGGGCTGGGTCAGCAACCGAATTCCAGTTTAGAGGCGGATTTGGTCGTGGACGTGGTCAGCCAC
CTCAGTAA

Translation (165 aa):
MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWY
LTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGADKKA
EAGAGSATEFQFRGGFGRGRGQPPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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