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Report for CCDS26134.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26134.1 Public Mus musculus 12 Serpina10 23 108 98 CCDS HistoryNCBI Gene:217847Re-query CCDS DB by CCDS ID:26134.1Re-query CCDS DB by GeneID:217847See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26134.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044231.11 ENSMUSP00000048357.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044231.11Link to Ensembl Protein Viewer:ENSMUSP00000048357.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000044231Re-query CCDS DB by Protein ID:ENSMUSP00000048357
Original member NCBI NM_144834.4 NP_659083.2 Updated not alive Link to Nucleotide Sequence:NM_144834.4Link to Protein Sequence:NP_659083.2Re-query CCDS DB by Nucleotide ID:NM_144834Re-query CCDS DB by Protein ID:NP_659083
Current member NCBI NM_144834.5 NP_659083.2 Accepted alive Link to Nucleotide Sequence:NM_144834.5Link to Protein Sequence:NP_659083.2Re-query CCDS DB by Nucleotide ID:NM_144834Re-query CCDS DB by Protein ID:NP_659083Link to BLAST:NP_659083.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659083.2 448 Q8R121-1 448 100% 0 0

Chromosomal Locations for CCDS 26134.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 103616837 103617028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103624332 103624482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103626610 103626883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103628229 103628958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGAGGGTGGCTTCTAGCCTCTTTCTTCCTGTCCTCCTGACAGAGGTGTGGCTGGTGACTAGTTTCAATC
TCAGCTCCCATTCACCAGAGGCTTCCGTTCACCTGGAGTCTCAGGATTATGAGAATCAAACCTGGGAAGA
GTACACACGGACTGATCCCAGGGAGGAGGAGGAGGAGGAGGAGGAAAAGGAGGAAGGCAAGGATGAGGAA
TATTGGCTGAGGGCCAGTCAGCAGCTCTCCAATGAGACTTCAAGCTTTGGGTTCAACCTGCTTCGAAAGA
TCTCCATGAGGCACGACGGCAATGTGATCTTCTCACCTTTTGGCCTGTCTGTGGCCATGGTGAATTTGAT
GCTGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCTGAGCCAAGCA
GGACCCCTGATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCC
TCAGCCAGGGTAGCTTTGCCTTCATCCACAAGGACTTTGATATCAAAGAGACCTATTTCAATCTCTCCAA
GAAGTATTTTGATATAGAGTATGTGTCTATAAATTTTCAAAATTCCTCACAAGCCAGAGGGCTCATAAAC
CACTGCATTGTCAAAGAGACTGAGGGGAAAATCCCCAAGCTTTTTGATGAGATTAATCCTGAAACAAAGT
TAATTCTGGTGGACTACGTCTTGTTCAAAGGGAAGTGGCTGACTCCATTTGACCCCAGCTTCACTGAGGC
CGACACTTTCCACCTGGACAAGTACAGGGCAATTAAGGTGCCCATGATGTACCGGGAAGGGAACTTTACC
TCCACCTTTGACAAGAAGTTCCGCTGTCACATCCTCAAACTGCCCTACCAAGGAAATGCCACCATGCTAG
TGGTCCTCATGGAGAAGACAGGTGATTACTTGGCCCTGGAGGACTACTTGACCGTGGATCTCGTGGAGAC
ATGGCTGCAGAATATGAAAACCAGGAAAATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTAT
GAGATGCACGAGCTGCTCAAACAGATGGGAATCAGGAGGCTCTTCTCCACCTCAGCTGACCTCAGCGAAC
TCTCAGCCATGGCAAGAAACCTTCAGGTGTCCAGGGTTTTACAACAGTCGGTGCTTGAGGTGGATGAAAG
GGGAACAGAAGCAGTGTCAGGGACGCTGTCAGAGATTATCGCTTACTCCATGCCTCCTGCCATCAAAGTG
AACCGGCCTTTTCACTTCATCATCTATGAGGAGATGTCCAGGATGCTCCTATTTCTGGGCAGGGTGGTAA
ACCCCACAGTCCTGTGA

Translation (448 aa):
MRVASSLFLPVLLTEVWLVTSFNLSSHSPEASVHLESQDYENQTWEEYTRTDPREEEEEEEEKEEGKDEE
YWLRASQQLSNETSSFGFNLLRKISMRHDGNVIFSPFGLSVAMVNLMLGTKGETKVQIENGLNLQALSQA
GPLILPALFKKVKETFSSNRDLGLSQGSFAFIHKDFDIKETYFNLSKKYFDIEYVSINFQNSSQARGLIN
HCIVKETEGKIPKLFDEINPETKLILVDYVLFKGKWLTPFDPSFTEADTFHLDKYRAIKVPMMYREGNFT
STFDKKFRCHILKLPYQGNATMLVVLMEKTGDYLALEDYLTVDLVETWLQNMKTRKMEVFFPKFKLNQRY
EMHELLKQMGIRRLFSTSADLSELSAMARNLQVSRVLQQSVLEVDERGTEAVSGTLSEIIAYSMPPAIKV
NRPFHFIIYEEMSRMLLFLGRVVNPTVL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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