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Report for CCDS8834.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8834.1 Public Homo sapiens 12 KRT73 24 110 108 CCDS HistoryNCBI Gene:319101Re-query CCDS DB by CCDS ID:8834.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8834.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305748.7 ENSP00000307014.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305748.7Link to Ensembl Protein Viewer:ENSP00000307014.3Re-query CCDS DB by Nucleotide ID:ENST00000305748Re-query CCDS DB by Protein ID:ENSP00000307014
Original member Current member NCBI NM_175068.3 NP_778238.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175068.3Link to Protein Sequence:NP_778238.1Re-query CCDS DB by Nucleotide ID:NM_175068Re-query CCDS DB by Protein ID:NP_778238Link to BLAST:NP_778238.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778238.1 540 Q86Y46-1 540 100% 0 0

Chromosomal Locations for CCDS 8834.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52608196 52608452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52609247 52609281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52610615 52610835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52611204 52611329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52613688 52613852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52614579 52614674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52615279 52615339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52616166 52616380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52618078 52618524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1623 nt):
ATGAGCCGCCAATTCACCTACAAGTCGGGAGCTGCTGCCAAGGGGGGCTTCAGCGGCTGCTCCGCTGTGC
TCTCAGGGGGCAGCTCATCCTCCTACCGAGCAGGGGGCAAAGGGCTCAGTGGAGGCTTCAGCAGTCGGAG
CCTTTACAGCCTGGGGGGTGCCCGGAGCATCTCTTTCAATGTGGCCAGTGGCAGTGGGTGGGCAGGAGGC
TATGGATTTGGCCGGGGCCGGGCCAGTGGCTTTGCTGGCAGCATGTTTGGCAGTGTGGCCTTGGGGTCCG
TGTGTCCGTCGTTGTGCCCGCCCGGGGGTATCCATCAGGTCACCATCAACAAGAGCCTCCTGGCACCCCT
GAACGTGGAGCTGGACCCTGAAATCCAGAAAGTGCGTGCCCAGGAGCGGGAGCAGATCAAGGTGCTGAAC
AACAAGTTCGCCTCCTTCATTGACAAGGTGCGGTTCCTGGAGCAGCAGAACCAGGTGCTGGAGACCAAGT
GGGAGCTGCTACAGCAGCTGGACCTGAACAACTGCAAGAATAACCTGGAGCCCATCCTTGAGGGCTACAT
CAGCAACCTGCGGAAGCAGCTGGAGACGCTGTCTGGGGACAGGGTGAGGCTGGACTCGGAGCTGAGGAGC
GTGCGCGAAGTGGTGGAGGACTACAAGAAGAGGTATGAAGAAGAAATAAACAAGCGCACAACTGCTGAGA
ATGAATTTGTGGTGCTTAAGAAGGACGTGGACGCAGCTTACACGAGCAAAGTGGAGCTGCAGGCCAAGGT
GGATGCCCTGGATGGAGAAATCAAGTTCTTCAAGTGTCTGTACGAGGGGGAGACTGCTCAGATCCAGTCC
CACATCAGCGACACGTCCATCATCCTGTCCATGGACAACAACCGGAACCTGGACCTGGACAGCATCATTG
CTGAGGTCCGTGCCCAGTATGAGGAGATCGCCCGGAAGAGCAAGGCCGAGGCCGAGGCCCTGTACCAGAC
CAAGTTCCAGGAGCTGCAGCTAGCAGCCGGCCGGCATGGGGATGACCTGAAACACACCAAAAATGAGATC
TCAGAGCTGACCCGTCTCATCCAAAGACTGCGCTCGGAGATTGAGAGTGTGAAGAAGCAGTGTGCCAACC
TGGAGACGGCCATCGCTGACGCCGAGCAGCGGGGGGACTGTGCCCTCAAGGATGCCAGGGCCAAGCTGGA
TGAGCTGGAGGGCGCCCTGCAGCAGGCCAAGGAGGAGCTGGCACGGATGCTGCGCGAGTACCAAGAGCTT
TTGAGCGTGAAGCTGTCCCTGGATATTGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTGCA
GGATGTCCGGAGAATATACCAACTCCGTGAGCATTTCGGTCATCAACAGCTCCATGGCCGGGATGGCAGG
CACAGGGGCTGGCTTTGGATTCAGCAATGCTGGCACCTACGGCTACTGGCCCAGCTCTGTCAGCGGGGGC
TACAGCATGCTGCCTGGGGGCTGTGTCACTGGCAGTGGGAACTGTAGCCCCCGTGGGGAAGCCAGGACCA
GGCTGGGGAGTGCAAGTGAATTCAGGGACTCCCAGGGAAAGACCTTAGCTCTAAGCTCACCCACCAAAAA
AACCATGAGATAA

Translation (540 aa):
MSRQFTYKSGAAAKGGFSGCSAVLSGGSSSSYRAGGKGLSGGFSSRSLYSLGGARSISFNVASGSGWAGG
YGFGRGRASGFAGSMFGSVALGSVCPSLCPPGGIHQVTINKSLLAPLNVELDPEIQKVRAQEREQIKVLN
NKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRS
VREVVEDYKKRYEEEINKRTTAENEFVVLKKDVDAAYTSKVELQAKVDALDGEIKFFKCLYEGETAQIQS
HISDTSIILSMDNNRNLDLDSIIAEVRAQYEEIARKSKAEAEALYQTKFQELQLAAGRHGDDLKHTKNEI
SELTRLIQRLRSEIESVKKQCANLETAIADAEQRGDCALKDARAKLDELEGALQQAKEELARMLREYQEL
LSVKLSLDIEIATYRKLLEGEECRMSGEYTNSVSISVINSSMAGMAGTGAGFGFSNAGTYGYWPSSVSGG
YSMLPGGCVTGSGNCSPRGEARTRLGSASEFRDSQGKTLALSSPTKKTMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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