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Report for CCDS74493.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74493.1 Public Homo sapiens 2 DNAJC27 24 110 108 CCDS HistoryNCBI Gene:51277Re-query CCDS DB by CCDS ID:74493.1Re-query CCDS DB by GeneID:51277See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74493.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534855.5 ENSP00000440086.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534855.5Link to Ensembl Protein Viewer:ENSP00000440086.2Re-query CCDS DB by Nucleotide ID:ENST00000534855Re-query CCDS DB by Protein ID:ENSP00000440086
Original member Current member NCBI NM_001198559.1 NP_001185488.1 Accepted alive Link to Nucleotide Sequence:NM_001198559.1Link to Protein Sequence:NP_001185488.1Re-query CCDS DB by Nucleotide ID:NM_001198559Re-query CCDS DB by Protein ID:NP_001185488Link to BLAST:NP_001185488.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185488.1 177 Q9NZQ0-3 177 100% 0 0

Chromosomal Locations for CCDS 74493.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 24947743 24947748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24957043 24957165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24957810 24957974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24963405 24963474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24967211 24967293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24971818 24971904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGGAGGCCAACATGCCGAAGCGGAAGGAGCCCGGCAGGTCTCTCCGCATCAAAGTCATCTCCATGGGCA
ACGCCGAAGTGGGGAAAAGCTGTATTATAAAGCGATACTGTGAGAAAAGATTCGTGTCTAAATACCTGGC
AACAATTGGAATTGACTATGGAGTCACAAAGGTACACGTCAGAGACAGAGAAATCAAAGTTAACATCTTT
GATATGGCTGGACATCCCTTCTTCTATGAGGTTCGAAATGAGTTTTACAAGGACACACAGGGTGTGATAC
TGGTCTATGATGTTGGGCAGAAAGACTCCTTTGACGCCCTTGATGCGTGGCTGGCAGAAATGAAGCAAGA
GCTTGGACCTCATGGAAACATGGAAAATATTATATTTGTAGTTTGTGCCAACAAGATTGATTGTACCAAA
CATCGCTGTGTAGATGAAAGTGAAGGACGTCTTTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACTT
CAGCACAAACTGGAGAAGGCATTAATGAGATGTTCCAGGGATGA

Translation (177 aa):
MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIF
DMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTK
HRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQG


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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