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Report for CCDS56604.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56604.1 Public Homo sapiens X YIPF6 24 110 108 CCDS HistoryNCBI Gene:286451Re-query CCDS DB by CCDS ID:56604.1Re-query CCDS DB by GeneID:286451See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56604.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374622.3 ENSP00000363751.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374622.3Link to Ensembl Protein Viewer:ENSP00000363751.2Re-query CCDS DB by Nucleotide ID:ENST00000374622Re-query CCDS DB by Protein ID:ENSP00000363751
Original member Current member NCBI NM_001195214.2 NP_001182143.1 Accepted alive Link to Nucleotide Sequence:NM_001195214.2Link to Protein Sequence:NP_001182143.1Re-query CCDS DB by Nucleotide ID:NM_001195214Re-query CCDS DB by Protein ID:NP_001182143Link to BLAST:NP_001182143.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182143.1 193 Q96EC8-2 193 100% 0 0

Chromosomal Locations for CCDS 56604.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 68499067 68499123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68513327 68513405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68518770 68518812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68521372 68521497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68522760 68522917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68531881 68531999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCGGAAGCGGAGGAGTCTCCAGGAGACCCGGGGACAGCATCGCCCAGGCCCCTGATGCGTGATCTAA
AAGCTGTTGGGAAAAAATTCATGCATGTTTTGTACCCAAGGAAAAGTAATACTCTTTTGAGAGATTGGGA
TTTGTGGGGCCCTTTGATCCTTTGTGTGACACTCGCATTAATGCTGCAAAGAGACTCTGCAGATAGTGAA
AAAGATGGAGGGCCCCAATTTGCAGAGGTGTTTGTCATTGTCTGGTTTGGTGCAGTTACCATCACCCTCA
ACTCAAAACTTCTTGGAGGGAACATATCTTTTTTTCAGAGCCTCTGTGTGCTGGGTTACTGTATACTTCC
CTTGACAGTAGCAATGCTGATTTGCCGGCTGGTACTTTTGGCTGATCCAGGACCTGTAAACTTCATGGTT
CGGCTTTTTGTGGTGATTGTGATGTTTGCCTGGTCTATAGTTGCCTCCACAGCTTTCCTTGCTGATAGCC
AGCCTCCAAACCGCAGAGCCCTAGCTGTTTATCCTGTTTTCCTGTTTTACTTTGTCATCAGTTGGATGAT
TCTCACCTTTACTCCTCAGTAA

Translation (193 aa):
MAEAEESPGDPGTASPRPLMRDLKAVGKKFMHVLYPRKSNTLLRDWDLWGPLILCVTLALMLQRDSADSE
KDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLICRLVLLADPGPVNFMV
RLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWMILTFTPQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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